DRSC/TRiP Functional Genomics Resources

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Protein Alignment OR4C13 and srx-8

DIOPT Version :9

Sequence 1:NP_001001955.2 Gene:OR4C13 / 283092 HGNCID:15169 Length:309 Species:Homo sapiens
Sequence 2:NP_503244.2 Gene:srx-8 / 182605 WormBaseID:WBGene00005899 Length:304 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OR4C13NP_001001955.2 7tm_4 29..303 CDD:304433
7tm_1 39..285 CDD:278431
srx-8NP_503244.2 7tm_GPCRs 12..246 CDD:391938
TM helix 3 82..112 CDD:341315
TM helix 4 123..143 CDD:341315
TM helix 5 168..193 CDD:341315
TM helix 6 215..242 CDD:341315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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