Sequence 1: | NP_001001955.2 | Gene: | OR4C13 / 283092 | HGNCID: | 15169 | Length: | 309 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012824346.3 | Gene: | LOC105948131 / 105948131 | -ID: | - | Length: | 264 | Species: | Xenopus tropicalis |
Alignment Length: | 265 | Identity: | 100/265 - (37%) |
---|---|---|---|
Similarity: | 154/265 - (58%) | Gaps: | 19/265 - (7%) |
- Green bases have known domain annotations that are detailed below.
Human 44 VVTITASPSLRSPMYFFLAYLSFIDACYSSVNTPKLITDSLYENKTILFNGCMTQVFGEHFFRGV 108
Human 109 ---EVILLTVMAYDHYVAICKPLHYTTVMKQHVCSLLVGVSWVGGFLHATIQILFICQLPFCGPN 170
Human 171 VIDHFMCDLYTLINLACTN--THTLGLFIAANSGFICLLNCLLLLVSCV-VILYSLKTHSLEARH 232
Human 233 EALSTCVSHITVVILSFIPCIFVYMRP-----PATLPIDKAVAVFYTMITSMLNPLIYTLRNAQM 292
Human 293 KNAIR 297 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
OR4C13 | NP_001001955.2 | 7tm_4 | 29..303 | CDD:304433 | 100/265 (38%) |
7tm_1 | 39..285 | CDD:278431 | 94/251 (37%) | ||
LOC105948131 | XP_012824346.3 | 7tmA_OR | 1..249 | CDD:320092 | 96/255 (38%) |
TM helix 2 | 15..37 | CDD:320092 | 11/21 (52%) | ||
TM helix 3 | 53..75 | CDD:320092 | 7/24 (29%) | ||
TM helix 4 | 98..114 | CDD:320092 | 3/15 (20%) | ||
TM helix 5 | 151..174 | CDD:320092 | 9/24 (38%) | ||
TM helix 6 | 193..215 | CDD:320092 | 9/21 (43%) | ||
TM helix 7 | 224..249 | CDD:320092 | 12/27 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
NCBI | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |