DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR6 and gpr6

DIOPT Version :9

Sequence 1:NP_001273028.1 Gene:GPR6 / 2830 HGNCID:4515 Length:377 Species:Homo sapiens
Sequence 2:XP_017949566.1 Gene:gpr6 / 100486442 XenbaseID:XB-GENE-997133 Length:327 Species:Xenopus tropicalis


Alignment Length:312 Identity:222/312 - (71%)
Similarity:267/312 - (85%) Gaps:7/312 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    66 NGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLA 130
            |.|||||:..|       :..:||||::||:|||:||.|||:|||:|..||.||||||||:||||
 Frog    23 NASLELSAFFS-------VFTINPWDIMLCISGTIIACENAIVVAIIFYTPTLRTPMFVLIGSLA 80

Human   131 TADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRR 195
            |||||||.||||:|||||::.|||:||:|||||||||.|||||||||||||||||||||||.|.:
 Frog    81 TADLLAGFGLILNFVFQYVIQSETISLITVGFLVASFTASVSSLLAITVDRYLSLYNALTYSSEK 145

Human   196 TLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVFGIMLHLY 260
            |:|.:|::|..||.|||.||||||||||||.:.::||:|:||.:|:|.|||.:||.:|.:|||||
 Frog   146 TILWIHMMLVVTWGVSLCLGLLPVLGWNCLDDDSSCSIVKPLTKSNVTLLSTSFFFIFILMLHLY 210

Human   261 VRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVY 325
            ::||::|.|||||||||||.|...|..||:|||.|||::||||||||||||||||||.|:.|:||
 Frog   211 IKICKIVCRHAHQIALQQHFLTASHYVATKKGVSTLAIILGTFGASWLPFAIYCVVGDHDYPSVY 275

Human   326 TYATLLPATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSEV 377
            ||||||||||||||||||||:|||||||::|:|.|||:||||.|||||||:|
 Frog   276 TYATLLPATYNSMINPIIYAYRNQEIQRSMWVLFCGCYQSKVSFRSRSPSDV 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR6NP_001273028.1 7tmA_GPR6 88..355 CDD:320628 198/266 (74%)
TM helix 1 89..115 CDD:320628 17/25 (68%)
TM helix 2 122..147 CDD:320628 21/24 (88%)
TM helix 3 156..186 CDD:320628 27/29 (93%)
TM helix 4 198..218 CDD:320628 11/19 (58%)
TM helix 5 237..266 CDD:320628 16/28 (57%)
TM helix 6 287..317 CDD:320628 24/29 (83%)
TM helix 7 323..348 CDD:320628 22/24 (92%)
gpr6XP_017949566.1 7tmA_GPR6 38..305 CDD:320628 198/266 (74%)
TM helix 1 39..65 CDD:320628 17/25 (68%)
TM helix 2 72..97 CDD:320628 21/24 (88%)
TM helix 3 106..136 CDD:320628 27/29 (93%)
TM helix 4 148..168 CDD:320628 11/19 (58%)
TM helix 5 187..216 CDD:320628 16/28 (57%)
TM helix 6 237..267 CDD:320628 24/29 (83%)
TM helix 7 273..298 CDD:320628 22/24 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 372 1.000 Domainoid score I6737
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38026
Inparanoid 1 1.050 461 1.000 Inparanoid score I8233
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG43095
OrthoDB 1 1.010 - - D200927at32523
OrthoFinder 1 1.000 - - FOG0012311
OrthoInspector 1 1.000 - - oto151223
Panther 1 1.100 - - LDO PTHR22750
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11163
SonicParanoid 1 1.000 - - X10254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.110

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