DRSC/TRiP Functional Genomics Resources

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Protein Alignment POC1B and CAF4

DIOPT Version :9

Sequence 1:NP_758440.1 Gene:POC1B / 282809 HGNCID:30836 Length:478 Species:Homo sapiens
Sequence 2:NP_012962.3 Gene:CAF4 / 853908 SGDID:S000001744 Length:643 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POC1BNP_758440.1 WD40 10..298 CDD:238121
WD 1 16..55
WD40 repeat 21..58 CDD:293791
WD 2 58..99
WD40 repeat 63..100 CDD:293791
WD 3 101..139
WD40 repeat 106..142 CDD:293791
WD 4 142..181
WD40 repeat 147..182 CDD:293791
WD 5 183..223
WD40 repeat 190..225 CDD:293791
WD 6 226..265
WD40 repeat 231..267 CDD:293791
WD 7 268..307
WD40 repeat 273..299 CDD:293791
CAF4NP_012962.3 Caf4 65..124 CDD:402971
WD40 318..641 CDD:238121
WD40 repeat 322..360 CDD:293791
WD40 repeat 366..422 CDD:293791
WD40 repeat 427..461 CDD:293791
WD40 repeat 472..526 CDD:293791
WD40 repeat 532..563 CDD:293791
WD40 repeat 571..611 CDD:293791
WD40 repeat 617..641 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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