| Sequence 1: | NP_758440.1 | Gene: | POC1B / 282809 | HGNCID: | 30836 | Length: | 478 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_009793.1 | Gene: | ARC40 / 852536 | SGDID: | S000000438 | Length: | 384 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 453 | Identity: | 97/453 - (21%) |
|---|---|---|---|
| Similarity: | 154/453 - (33%) | Gaps: | 158/453 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Human 77 SASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQR------ 135
Human 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW----DTTNKQC-----VNNFSDSVGFANF 191
Human 192 VDFNPSGTCIASAGSDQTVKV--------WDV--RVNKLLQHYQVHSGGVNCISFHPSGNYLITA 246
Human 247 SSDGTLKI-------LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASG--------GADTQVLL 296
Human 297 WRTNFDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEVIDLQISTPPV 361
Human 362 MDILSFDSTTTTETSGRTLPDKG-------EEAC-GYFLNPSLMSPECLPTTTKKKTEDMSDLPC 418
Human 419 ESQRSIPLAV---TDALEHIMEQLNVLTQTVSILEQRLTLTEDKLKDCLENQQKLFSAVQQKS 478 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| POC1B | NP_758440.1 | WD40 | 10..298 | CDD:238121 | 59/260 (23%) |
| WD 1 | 16..55 | ||||
| WD40 repeat | 21..58 | CDD:293791 | |||
| WD 2 | 58..99 | 4/21 (19%) | |||
| WD40 repeat | 63..100 | CDD:293791 | 4/22 (18%) | ||
| WD 3 | 101..139 | 11/43 (26%) | |||
| WD40 repeat | 106..142 | CDD:293791 | 10/41 (24%) | ||
| WD 4 | 142..181 | 13/47 (28%) | |||
| WD40 repeat | 147..182 | CDD:293791 | 13/43 (30%) | ||
| WD 5 | 183..223 | 11/49 (22%) | |||
| WD40 repeat | 190..225 | CDD:293791 | 8/44 (18%) | ||
| WD 6 | 226..265 | 11/45 (24%) | |||
| WD40 repeat | 231..267 | CDD:293791 | 11/42 (26%) | ||
| WD 7 | 268..307 | 8/46 (17%) | |||
| WD40 repeat | 273..299 | CDD:293791 | 7/33 (21%) | ||
| ARC40 | NP_009793.1 | WD40 | <5..315 | CDD:225201 | 86/405 (21%) |
| WD40 repeat | 22..61 | CDD:293791 | 10/42 (24%) | ||
| WD40 repeat | 67..104 | CDD:293791 | 12/37 (32%) | ||
| WD40 repeat | 110..149 | CDD:293791 | 10/44 (23%) | ||
| WD40 repeat | 157..203 | CDD:293791 | 14/60 (23%) | ||
| WD40 repeat | 217..254 | CDD:293791 | 10/85 (12%) | ||
| WD40 repeat | 258..295 | CDD:293791 | 9/37 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||