DRSC/TRiP Functional Genomics Resources

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Protein Alignment POC1B and wdr-5.1

DIOPT Version :9

Sequence 1:NP_758440.1 Gene:POC1B / 282809 HGNCID:30836 Length:478 Species:Homo sapiens
Sequence 2:NP_497749.1 Gene:wdr-5.1 / 175474 WormBaseID:WBGene00006474 Length:376 Species:Caenorhabditis elegans


Alignment Length:310 Identity:92/310 - (29%)
Similarity:148/310 - (47%) Gaps:16/310 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     2 ASATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
            ||.:.:..|....:||..:|:|...||.||.|.|:|.|..:.:||...........|||..|..:
 Worm    71 ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135

Human    67 QFSPHGNLLASASRDRTVRLW--IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
            .:|.....:.|||.|:|::::  :..:..|  ..|.|...|...:|:.....:.:.|.|:|:::|
 Worm   136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTK--TLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198

Human   130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN---- 190
            .:.....:.:|..|:..|....|:.||.||.|.|.|..::||||.|.||:....|.   .|    
 Worm   199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD---ENPPVA 260

Human   191 FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS---GNYLITASSDGTL 252
            ||.|:|:|..|.::..|.|:|:||....|.|:.|..|.....||..:.|   |.::|:.|.|..:
 Worm   261 FVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKI 325

Human   253 KILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG--ADTQVLLWRTN 300
            .|.:|....::..|:|||.||..........:.|||.  .|.::.:||::
 Worm   326 YIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRSD 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POC1BNP_758440.1 WD40 10..298 CDD:238121 88/298 (30%)
WD 1 16..55 14/38 (37%)
WD40 repeat 21..58 CDD:293791 12/36 (33%)
WD 2 58..99 11/42 (26%)
WD40 repeat 63..100 CDD:293791 8/38 (21%)
WD 3 101..139 7/37 (19%)
WD40 repeat 106..142 CDD:293791 6/35 (17%)
WD 4 142..181 17/38 (45%)
WD40 repeat 147..182 CDD:293791 16/34 (47%)
WD 5 183..223 15/43 (35%)
WD40 repeat 190..225 CDD:293791 14/38 (37%)
WD 6 226..265 10/41 (24%)
WD40 repeat 231..267 CDD:293791 9/38 (24%)
WD 7 268..307 11/35 (31%)
WD40 repeat 273..299 CDD:293791 6/27 (22%)
wdr-5.1NP_497749.1 WD40 <76..372 CDD:225201 88/300 (29%)
WD40 79..373 CDD:238121 88/298 (30%)
WD40 repeat 90..127 CDD:293791 12/36 (33%)
WD40 repeat 133..169 CDD:293791 7/37 (19%)
WD40 repeat 174..210 CDD:293791 6/35 (17%)
WD40 repeat 217..252 CDD:293791 15/34 (44%)
WD40 repeat 259..295 CDD:293791 13/35 (37%)
WD40 repeat 303..340 CDD:293791 9/36 (25%)
WD40 repeat 346..372 CDD:293791 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161450764
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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