DRSC/TRiP Functional Genomics Resources

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Protein Alignment POC1B and wdr-5.1

DIOPT Version :10

Sequence 1:NP_758440.1 Gene:POC1B / 282809 HGNCID:30836 Length:478 Species:Homo sapiens
Sequence 2:NP_497749.1 Gene:wdr-5.1 / 175474 WormBaseID:WBGene00006474 Length:376 Species:Caenorhabditis elegans


Alignment Length:310 Identity:92/310 - (29%)
Similarity:148/310 - (47%) Gaps:16/310 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     2 ASATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
            ||.:.:..|....:||..:|:|...||.||.|.|:|.|..:.:||...........|||..|..:
 Worm    71 ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135

Human    67 QFSPHGNLLASASRDRTVRLW--IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
            .:|.....:.|||.|:|::::  :..:..|  ..|.|...|...:|:.....:.:.|.|:|:::|
 Worm   136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTK--TLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198

Human   130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN---- 190
            .:.....:.:|..|:..|....|:.||.||.|.|.|..::||||.|.||:....|.   .|    
 Worm   199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD---ENPPVA 260

Human   191 FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS---GNYLITASSDGTL 252
            ||.|:|:|..|.::..|.|:|:||....|.|:.|..|.....||..:.|   |.::|:.|.|..:
 Worm   261 FVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKI 325

Human   253 KILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG--ADTQVLLWRTN 300
            .|.:|....::..|:|||.||..........:.|||.  .|.::.:||::
 Worm   326 YIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRSD 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POC1BNP_758440.1 WD40 <5..300 CDD:441893 90/305 (30%)
WD 1 16..55 14/38 (37%)
WD40 repeat 21..58 CDD:293791 12/36 (33%)
WD 2 58..99 11/42 (26%)
WD40 repeat 63..100 CDD:293791 8/38 (21%)
WD 3 101..139 7/37 (19%)
WD40 repeat 106..142 CDD:293791 6/35 (17%)
WD 4 142..181 17/38 (45%)
WD40 repeat 147..182 CDD:293791 16/34 (47%)
WD 5 183..223 15/43 (35%)
WD40 repeat 190..225 CDD:293791 14/38 (37%)
WD 6 226..265 10/41 (24%)
WD40 repeat 231..267 CDD:293791 9/38 (24%)
WD 7 268..307 11/35 (31%)
WD40 repeat 273..299 CDD:293791 6/27 (22%)
wdr-5.1NP_497749.1 PRK13914 <2..>96 CDD:237555 7/24 (29%)
WD40 79..373 CDD:238121 88/298 (30%)
WD40 repeat 90..127 CDD:293791 12/36 (33%)
WD40 repeat 133..169 CDD:293791 7/37 (19%)
WD40 repeat 174..210 CDD:293791 6/35 (17%)
WD40 repeat 217..252 CDD:293791 15/34 (44%)
WD40 repeat 259..295 CDD:293791 13/35 (37%)
WD40 repeat 303..340 CDD:293791 9/36 (25%)
WD40 repeat 346..372 CDD:293791 5/25 (20%)

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