DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR4 and AstC-R1

DIOPT Version :9

Sequence 1:NP_005273.1 Gene:GPR4 / 2828 HGNCID:4497 Length:362 Species:Homo sapiens
Sequence 2:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster


Alignment Length:378 Identity:103/378 - (27%)
Similarity:169/378 - (44%) Gaps:66/378 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     5 TWEGCHV--DSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLSIADLLYI 67
            |::.|..  :|..| ||...||.||..:||..|.|.::...|..:.:....:|::||::||..::
  Fly    64 TYQHCIATRNSFAD-LFTVVLYGFVCIIGLFGNTLVIYVVLRFSKMQTVTNIYILNLAVADECFL 127

Human    68 CTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNI--YISIAFLCCISVDRYLAVAHPLRFARLRR 130
            ..:|..: |.:...:|..|...||  .::..|:|  :.|..||..:|.|||:||.||:...|.|.
  Fly   128 IGIPFLL-YTMRICSWRFGEFMCK--AYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRT 189

Human   131 VKTAVAVSSVVWAT-----------------ELGAN-SAPLFHDELFRDRYNHTFCFEKFPMEGW 177
            :..|..||::.|:|                 |.|.| |..:...:.::.....||.         
  Fly   190 LHIAKVVSAIAWSTSAVLMLPVILYASTVEQEDGINYSCNIMWPDAYKKHSGTTFI--------- 245

Human   178 VAWMNLYRVFVGFLFPWALMLLSYRGILRAVR------GSVSTE-RQEKAKIKRLALSLIAIVLV 235
                 ||..|:||..|...:|..|..::|.:|      |:.|.| |:...|:.||.|::|::.::
  Fly   246 -----LYTFFLGFATPLCFILSFYYLVIRKLRSVGPKPGTKSKEKRRAHRKVTRLVLTVISVYIL 305

Human   236 CFAPYHVLLLSRSAIYLGRP--WDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVA 298
            |:.|:.:   |:.|:....|  .|....|.:......:|.::  |...:||||..::|..|....
  Fly   306 CWLPHWI---SQVALIHSNPAQRDLSRLEILIFLLLGALVYS--NSAVNPILYAFLSENFRKSFF 365

Human   299 KALHNLLRFLASDKPQEMANASLTLE----TPLTSKRNSTAKAMTGSWAATPP 347
            ||      |...:| |:: ||.|.||    |...||:...:|.:..|....||
  Fly   366 KA------FTCMNK-QDI-NAQLQLEPSVFTKQGSKKRGGSKRLLTSNPQIPP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR4NP_005273.1 7tmA_GPR4 18..297 CDD:320488 82/307 (27%)
TM helix 1 20..44 CDD:320488 8/23 (35%)
TM helix 2 53..74 CDD:320488 6/20 (30%)
TM helix 3 91..113 CDD:320488 6/23 (26%)
TM helix 4 136..152 CDD:320488 8/33 (24%)
TM helix 5 179..202 CDD:320488 7/22 (32%)
TM helix 6 223..245 CDD:320488 6/21 (29%)
TM helix 7 265..290 CDD:320488 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..362 4/13 (31%)
AstC-R1NP_649040.2 7tm_4 88..368 CDD:304433 78/307 (25%)
7tm_1 94..353 CDD:278431 70/280 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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