DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slco1a6 and Oatp58Db

DIOPT Version :9

Sequence 1:NP_001368859.1 Gene:Slco1a6 / 28254 MGIID:1351906 Length:670 Species:Mus musculus
Sequence 2:NP_611658.3 Gene:Oatp58Db / 37544 FlyBaseID:FBgn0034715 Length:680 Species:Drosophila melanogaster


Alignment Length:677 Identity:172/677 - (25%)
Similarity:298/677 - (44%) Gaps:96/677 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 FAKIKVFLLALIWAYISKILSGVYMSTMLTQLERQFNISTSIVGLINGSFEMGNLLVIVFVSYFG 80
            ||...:|::....|.....::..|.:..:|.:|::|||.|.|.|||....::..:....|:||:.
  Fly    48 FATAHMFVIVYGIASCFLAMAFTYFTGTITTMEKRFNIPTKISGLITVGNDISTVFSSAFLSYYA 112

Mouse    81 TKLHRPIMIGVGCAVMGLGCFIISLPHFLMG----------RYEYETTISPTSNLS-SNSFLCVE 134
            ::.|||..:.:|..::.:.|.::..||...|          .|....:...:.|:: .|..||.|
  Fly   113 SRGHRPRWVALGLIIIAIFCLLMLTPHIFYGPGEEALRLTEEYGMSESFGASLNITEKNDSLCHE 177

Mouse   135 NRSQTLKPTQDPAECVKEIKSLMWIYVLVGNIIRGIGETPIMPLGISYIEDFAKSENSPLYIGIL 199
            ..|..|:...|....|     |.:|...:|    |||.:.....|:||::|.:.|..:|..:...
  Fly   178 KNSNCLERAGDYTPIV-----LFFIAQFIG----GIGCSLFYAPGLSYMDDNSASSKTPAMLSWS 233

Mouse   200 EVGKMIGPILGYLMGPFCANIYVDTGSVNTDDLTITPTDTRWVGAWWIGFLVCAGVNVLTSIPFF 264
            ...:|:||.:|:.|...|..:|:|.    .....||..|.||:||||||:::...:..::::...
  Fly   234 SFLRMLGPAMGFSMVSLCLRLYIDP----FKKPLITTNDPRWMGAWWIGWILLTFILTISAVFVG 294

Mouse   265 FFPKTLPKEGLQDNGDGTENAKEEKHRDKAKEENQGIIKEFFLM---MKNLFCNPIYMLCVLTSV 326
            .|||.:|:            ||..:.:...:|:.....:.|..|   :|.|..|.:|:..:|.|:
  Fly   295 MFPKEMPR------------AKARRLKADGEEDIPLAGRSFQDMLDSLKRLASNKVYVYNMLASI 347

Mouse   327 LQVNGVANIVIYKPKYLEHHFGISTAKAVFLIGLYTTPSVSAGYLISGFIMKKLKITLKKAAIIA 391
            |.:.|.....|:.|||:|..:..|.:.:....|.:.....:||.||||:::.|.|   ..|..:|
  Fly   348 LYLFGYMPYWIFTPKYIEIQYRQSASTSTMATGTWALGFSAAGILISGYVISKYK---PSARAMA 409

Mouse   392 LCLFMSECLL---SLCNFMLTCDTTPIA-GLTTSYEGIQQSFDMENKFLSDCNTRCNCLTKTWDP 452
            ...|:.:.|.   .||..::.||.:..| .|:....|            ..|:..|.|....:.|
  Fly   410 AWNFVVDYLTVAGMLCYVLVGCDESDRANSLSIVPTG------------DSCSASCVCEYVYYAP 462

Mouse   453 VCGNNGLAYMSPCLAGC-EKSVGTGANMVFQNCSCIRSSGNSSAVL-----------------GL 499
            ||....:.::|.|.||| :|::......::..|.|:   ||.|:::                 |.
  Fly   463 VCSPENITFISACHAGCTDKAINELGKTIYTGCRCM---GNVSSIISLSNVTSLASQSQIAMDGA 524

Mouse   500 CKKGPDCANKLQYFLIITVFCCFFYSLATIPGYMVFLRCMKSEEKSLGIGLQAFFMRLFAGIPAP 564
            |.  .||..:...||.:..|..|..:.......::.|||:.|::|:..:|..:....:.|.||:|
  Fly   525 CP--VDCNKQFLIFLAVMCFLKFVGATGRSSNLLLALRCVPSKDKTFSLGFGSMVYSVLAFIPSP 587

Mouse   565 IYFGALIDRTCLHWGTLKCGEPGACRTYEVSSFRRLYLGLPAALRGSIILPSFFILRL---IRKL 626
            |.||.::|..||.||. .|...|.|..|:..|.|.....:.|:|   |.|.||:.:.:   .:.:
  Fly   588 IVFGWMLDSYCLVWGK-TCSSKGNCWIYDTKSLRYTMNLVCASL---IFLGSFWNIGVWYHAKDM 648

Mouse   627 QIPGDTD-------SSEIELAETKPTE 646
            ::..:.:       |.:|||.| ||.:
  Fly   649 KVFDEDEKTVQAKQSDDIELKE-KPND 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slco1a6NP_001368859.1 oat 1..625 CDD:273279 165/647 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 633..670 7/21 (33%)
Oatp58DbNP_611658.3 OATP 53..619 CDD:281175 155/611 (25%)
MFS 55..>410 CDD:119392 97/382 (25%)
KAZAL_SLC21 447..499 CDD:238650 14/54 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1029129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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