DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slco1b2 and Oatp58Db

DIOPT Version :9

Sequence 1:NP_065241.1 Gene:Slco1b2 / 28253 MGIID:1351899 Length:689 Species:Mus musculus
Sequence 2:NP_611658.3 Gene:Oatp58Db / 37544 FlyBaseID:FBgn0034715 Length:680 Species:Drosophila melanogaster


Alignment Length:645 Identity:177/645 - (27%)
Similarity:296/645 - (45%) Gaps:110/645 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    31 ALSFSYICKALGGVIMKSSITQIERRFDIPSSISGLIDGGFEIGNLLVIVFVSYFGSKLHRPKLI 95
            |::|:|         ...:||.:|:||:||:.|||||..|.:|..:....|:||:.|:.|||:.:
  Fly    66 AMAFTY---------FTGTITTMEKRFNIPTKISGLITVGNDISTVFSSAFLSYYASRGHRPRWV 121

Mouse    96 GTGCFIMGIGSILTALPHFFMGYYRYATENDISSLHNSTLTCLVNQTTSLTGTSPEIMEKG---C 157
            ..|..|:.|..:|...||.|.|....|..          ||.....:.|. |.|..|.||.   |
  Fly   122 ALGLIIIAIFCLLMLTPHIFYGPGEEALR----------LTEEYGMSESF-GASLNITEKNDSLC 175

Mouse   158 -EKGSN------SYTWIYV-LMGNMLRGIGETPIVPLGVSYIDDFAKEGNSSMYLGTLHTIAMIG 214
             ||.||      .||.|.: .:...:.|||.:.....|:||:||.:....:...|.....:.|:|
  Fly   176 HEKNSNCLERAGDYTPIVLFFIAQFIGGIGCSLFYAPGLSYMDDNSASSKTPAMLSWSSFLRMLG 240

Mouse   215 PILGFIMSSVFAKLYVDVGYVDLRSVRITPQDARWVGAWWLGFIVNGLLCIICSIPFFFLPKIPK 279
            |.:||.|.|:..:||:|    ..:...||..|.||:||||:|:|   ||..|.:|...|:...||
  Fly   241 PAMGFSMVSLCLRLYID----PFKKPLITTNDPRWMGAWWIGWI---LLTFILTISAVFVGMFPK 298

Mouse   280 RSQKERKNSASLHVLKTD-EDKNPVTNPTTQEKQAPANLTGFLWSLRSILTNEQYVIFLILTLLQ 343
            ...:     |....||.| |:..|:...:.|:         .|.||:.:.:|:.||..::.::|.
  Fly   299 EMPR-----AKARRLKADGEEDIPLAGRSFQD---------MLDSLKRLASNKVYVYNMLASILY 349

Mouse   344 ISSFIGSFTYLFKFIEQQFGQTASQANFLLGVITIPTMASGMFLGGYLIKRLKLTLLGITKFVFF 408
            :..::..:.:..|:||.|:.|:||.:....|...:...|:|:.:.||:|.:.|.:...:..:.|.
  Fly   350 LFGYMPYWIFTPKYIEIQYRQSASTSTMATGTWALGFSAAGILISGYVISKYKPSARAMAAWNFV 414

Mouse   409 TTTMAYVFYLSYFLLICENKAFA-GLTLTYDGMNPVDSHIDVPLSYCNSDCICDKNQWEPVCGEN 472
            ...:.....|.|.|:.|:....| .|::...|    ||        |::.|:|:...:.|||...
  Fly   415 VDYLTVAGMLCYVLVGCDESDRANSLSIVPTG----DS--------CSASCVCEYVYYAPVCSPE 467

Mouse   473 GVTYISPCLAGCKSFRGDKKLMNIE---FYDCSCVSGSGFQKGNHSARL---------------- 518
            .:|:||.|.|||.    ||.:..:.   :..|.|:       ||.|:.:                
  Fly   468 NITFISACHAGCT----DKAINELGKTIYTGCRCM-------GNVSSIISLSNVTSLASQSQIAM 521

Mouse   519 -GECPRDKCKTKYYFYITFQVIISFFTALGSTSLMLILIRSVQPELKSLGMGFHSLVVRTLGGIL 582
             |.||.| |..::..::.....:.|..|.|.:|.:|:.:|.|..:.|:..:||.|:|...|..|.
  Fly   522 DGACPVD-CNKQFLIFLAVMCFLKFVGATGRSSNLLLALRCVPSKDKTFSLGFGSMVYSVLAFIP 585

Mouse   583 APVYYGALIDRTCMKWSVTSCGARGACRLYNSRLFGMIYVGLSIALKTPILLLYVALIYV 642
            :|:.:|.::|..|:.|..| |.::|.|.:|:::           :|:..:.|:..:||::
  Fly   586 SPIVFGWMLDSYCLVWGKT-CSSKGNCWIYDTK-----------SLRYTMNLVCASLIFL 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slco1b2NP_065241.1 MFS 26..557 CDD:421695 154/558 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 658..689
Oatp58DbNP_611658.3 OATP 53..619 CDD:281175 173/629 (28%)
MFS 55..>410 CDD:119392 114/384 (30%)
KAZAL_SLC21 447..499 CDD:238650 19/70 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1029129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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