DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slco1a1 and Oatp58Db

DIOPT Version :9

Sequence 1:NP_038825.1 Gene:Slco1a1 / 28248 MGIID:1351891 Length:670 Species:Mus musculus
Sequence 2:NP_611658.3 Gene:Oatp58Db / 37544 FlyBaseID:FBgn0034715 Length:680 Species:Drosophila melanogaster


Alignment Length:688 Identity:180/688 - (26%)
Similarity:304/688 - (44%) Gaps:106/688 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse    19 MKVFLMSLTCAYLAKSLSGVYMNSMLTQIERQFGIPTSVVGFITGSFEIGNLLLIVFVSYFGRKL 83
            |.|.:..:...:||.:.:  |....:|.:|::|.|||.:.|.||...:|..:....|:||:..:.
  Fly    53 MFVIVYGIASCFLAMAFT--YFTGTITTMEKRFNIPTKISGLITVGNDISTVFSSAFLSYYASRG 115

Mouse    84 HRPIIIGVGCVVMGLGCFLMASPHFLMG----------RYKYETTISPTSNLS-SNSFLCIENRT 137
            |||..:.:|.:::.:.|.||.:||...|          .|....:...:.|:: .|..||.|..:
  Fly   116 HRPRWVALGLIIIAIFCLLMLTPHIFYGPGEEALRLTEEYGMSESFGASLNITEKNDSLCHEKNS 180

Mouse   138 QTLKPTQDPTECVKEIKSLMWIYVLIGNTMRGIGETPIMPLGISYIEDFAKSENSPLYIGILEMG 202
            ..|:...|.|..|     |.:|...||    |||.:.....|:||::|.:.|..:|..:......
  Fly   181 NCLERAGDYTPIV-----LFFIAQFIG----GIGCSLFYAPGLSYMDDNSASSKTPAMLSWSSFL 236

Mouse   203 KIVGPIIGLLLGSFFARVYVDIGSVNTDDLTITPTDTRWVGAWWIGFLVCAGVNILTSIPFFFFP 267
            :::||.:|..:.|...|:|:|    ......||..|.||:||||||:::...:..::::....||
  Fly   237 RMLGPAMGFSMVSLCLRLYID----PFKKPLITTNDPRWMGAWWIGWILLTFILTISAVFVGMFP 297

Mouse   268 KTLPKKELQDNVDVTKYEKVEKHRERAKKENLGIT----KDFLPFMKSLCCNPIYMLFSLTSVLQ 328
            |.:|:         .|..:::...|    |::.:.    :|.|..:|.|..|.:|:...|.|:|.
  Fly   298 KEMPR---------AKARRLKADGE----EDIPLAGRSFQDMLDSLKRLASNKVYVYNMLASILY 349

Mouse   329 INGFASTFTFLPKYLEQQYGKSTSEAVFLIGVYSLPPVCLGYLISGFIMKKFKITVKKAAYIAFG 393
            :.|:...:.|.|||:|.||.:|.|.:....|.::|.....|.||||:::.|:|.:.:..|...|.
  Fly   350 LFGYMPYWIFTPKYIEIQYRQSASTSTMATGTWALGFSAAGILISGYVISKYKPSARAMAAWNFV 414

Mouse   394 LSLSEYFIFLCNYLLTCDNFPVAGLTTSYKGVQHPLYGEKNVLA------DCNTRCSCLTDTWDP 452
            :........||..|:.||....|                 |.|:      .|:..|.|....:.|
  Fly   415 VDYLTVAGMLCYVLVGCDESDRA-----------------NSLSIVPTGDSCSASCVCEYVYYAP 462

Mouse   453 VCGDNGLAYMSACLAGC-EKSVGTGTNMVFQNCSCIG--------------SSGNSSAVLGLCKK 502
            ||....:.::|||.||| :|::......::..|.|:|              :|.:..|:.|.|. 
  Fly   463 VCSPENITFISACHAGCTDKAINELGKTIYTGCRCMGNVSSIISLSNVTSLASQSQIAMDGACP- 526

Mouse   503 GPECDNKLQYFLIKSVFSSFIFSLAAIPGYMVLLRCVKSEEKSIGVGLHAFFIRLLAGIPAPVYF 567
             .:|:.:...||....|..|:.:.......::.||||.|::|:..:|..:....:||.||:|:.|
  Fly   527 -VDCNKQFLIFLAVMCFLKFVGATGRSSNLLLALRCVPSKDKTFSLGFGSMVYSVLAFIPSPIVF 590

Mouse   568 GALIDRTCLHWGTLKCGQPGACRMYDINRFRHIYLGLPAAVRGSSFLPAVFILILMRKFHFPGD- 631
            |.::|..||.||. .|...|.|.:||....|:. :.|..|           .||.:..|...|. 
  Fly   591 GWMLDSYCLVWGK-TCSSKGNCWIYDTKSLRYT-MNLVCA-----------SLIFLGSFWNIGVW 642

Mouse   632 IHSPDTELAEMKLTEKESECTDVCRSPKVENDGELKTK 669
            .|:.|     ||:.:::.:....    |..:|.|||.|
  Fly   643 YHAKD-----MKVFDEDEKTVQA----KQSDDIELKEK 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slco1a1NP_038825.1 oat 1..625 CDD:273279 168/641 (26%)
MFS 23..>396 CDD:119392 104/387 (27%)
KAZAL_SLC21 436..488 CDD:238650 16/58 (28%)
Oatp58DbNP_611658.3 OATP 53..619 CDD:281175 163/613 (27%)
MFS 55..>410 CDD:119392 103/382 (27%)
KAZAL_SLC21 447..499 CDD:238650 15/51 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1029129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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