DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLCO4A1 and CG30278

DIOPT Version :9

Sequence 1:XP_011527094.1 Gene:SLCO4A1 / 28231 HGNCID:10953 Length:768 Species:Homo sapiens
Sequence 2:NP_001286710.1 Gene:CG30278 / 246523 FlyBaseID:FBgn0050278 Length:275 Species:Drosophila melanogaster


Alignment Length:25 Identity:10/25 - (40%)
Similarity:15/25 - (60%) Gaps:0/25 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   402 MSTFSPKFLESQFSLSASEAATLFG 426
            ||..|.|..:|:.|..:|..::|||
  Fly   245 MSRMSRKSRKSRKSRKSSRKSSLFG 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLCO4A1XP_011527094.1 OATP 106..663 CDD:281175 10/25 (40%)
MFS 106..>489 CDD:119392 10/25 (40%)
KAZAL_SLC21 500..555 CDD:238650
CG30278NP_001286710.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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