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Protein Alignment GPD1 and Gpd1

DIOPT Version :9

Sequence 1:	NP_005267.2	Gene:	GPD1 / 2819	HGNCID:	4455	Length:	349	Species:	Homo sapiens
Sequence 2:	NP_071551.2	Gene:	Gpd1 / 60666	RGDID:	621381	Length:	349	Species:	Rattus norvegicus

Alignment Length:	349	Identity:	329/349 - (94%)
Similarity:	338/349 - (96%)	Gaps:	0/349 - (0%)

- Green bases have known domain annotations that are detailed below.

Human     1 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLP 65
            ||.||||||||||||||||||||.||:|||.||||||||||||||||:|||||||||||||||||
  Rat     1 MAGKKVCIVGSGNWGSAIAKIVGSNASQLAHFDPRVTMWVFEEDIGGRKLTEIINTQHENVKYLP 65

Human    66 GHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLK 130
            ||||||||||||||||||..||||:||||||||||||||||||||||..|||||||:||||||||
  Rat    66 GHKLPPNVVAVPDVVQAATGADILVFVVPHQFIGKICDQLKGHLKANTIGISLIKGIDEGPNGLK 130

Human   131 LISEVIGERLGIPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVD 195
            ||||||||.||||||||||||||||||:|||||||||||||||||||||||||||||||||||||
  Rat   131 LISEVIGESLGIPMSVLMGANIASEVAEEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVD 195

Human   196 TVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVAD 260
            ||||||||||:|||||||||||||||||||||||||||||||||||||||.||||||||||||||
  Rat   196 TVEICGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGSVSSATFLESCGVAD 260

Human   261 LITTCYGGRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLVDKFPLFMAV 325
            ||||||||||||||||||||||||||||||:|||||||||:|||||:|||||||||||||||.||
  Rat   261 LITTCYGGRNRKVAEAFARTGKSIEQLEKEMLNGQKLQGPQTARELHSILQHKGLVDKFPLFTAV 325

Human   326 YKVCYEGQPVGEFIHCLQNHPEHM 349
            ||||||||||||||.|||||||||
  Rat   326 YKVCYEGQPVGEFICCLQNHPEHM 349

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.