DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPD1 and Gpdh1

DIOPT Version :10

Sequence 1:NP_005267.2 Gene:GPD1 / 2819 HGNCID:4455 Length:349 Species:Homo sapiens
Sequence 2:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster


Alignment Length:352 Identity:234/352 - (66%)
Similarity:275/352 - (78%) Gaps:5/352 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASK-KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYL 64
            ||.| .||||||||||||||||||.|||.|.:|:.||||:|:||.|.|||||||||..|||||||
  Fly     1 MADKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEIINETHENVKYL 65

Human    65 PGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVD--EGPN 127
            .|||||||||||||:|:||::|||||||||||||...|.||.|.:|.||..||||||.|  || .
  Fly    66 KGHKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEG-G 129

Human   128 GLKLISEVIGERLGIPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQ 192
            |:.|||.:|...|.||.:||||||:|:|||:..||||||||.|...|::|::|.|..:||:.||.
  Fly   130 GIDLISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVD 194

Human   193 EVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCG 257
            :.|.||:||||||:||.||||.|||..|||||||||||||||||.|..:|..|...| ||.||||
  Fly   195 DADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLS-TFFESCG 258

Human   258 VADLITTCYGGRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLVDKFPLF 322
            ||||||||||||||:|:|||..:||:||:||||:|||||||||.||.|:..:|::|||.||||||
  Fly   259 VADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLF 323

Human   323 MAVYKVCYEGQPVGEFIHCLQNHPEHM 349
            .|::|:|.......:.|.|::||||||
  Fly   324 TAIHKICTNQLKPNDLIDCIRNHPEHM 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPD1NP_005267.2 glycerol3P_DH 5..342 CDD:274551 224/338 (66%)
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 224/338 (66%)

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