DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GOT1 and Got1

DIOPT Version :9

Sequence 1:NP_002070.1 Gene:GOT1 / 2805 HGNCID:4432 Length:413 Species:Homo sapiens
Sequence 2:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster


Alignment Length:406 Identity:229/406 - (56%)
Similarity:294/406 - (72%) Gaps:5/406 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNH 69
            |::|:||:...:.||.||..|::|.:|.||||.|||||||...|||||||:|.|..||:|..:||
  Fly    23 SIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIASDEQVNH 87

Human    70 EYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPV 134
            ||||:.||..|.:.|:.|.||.||||:||.|..|||::.||||||:.||||    :...|:|. |
  Fly    88 EYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFL----HTQLNRNV-V 147

Human   135 YVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGI 199
            |.|:||||||:.:|..|||..::||||||..||.||.:..|.||.:||..::::|||||||||||
  Fly   148 YYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAVIILHACAHNPTGI 212

Human   200 DPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLY 264
            |||.|||.::|.:|:.:.|||.|||||||||||:.:|||||.||||..|||.|..|||:||||||
  Fly   213 DPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSFAKNFGLY 277

Human   265 NERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMAD 329
            .||.|||.||.|...:...|.||:..::|..:|||||.|||||:..|:.|||.:||..:::.|:.
  Fly   278 CERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMASIQAMSS 342

Human   330 RILTMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVSGLT 394
            ||..||:.||.:|.||.|||||:||.:||||||:||||...|..|:::.|||||.:|||::|||.
  Fly   343 RIREMRTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKTGRISMSGLN 407

Human   395 TKNLDYVATSIHEAVT 410
            ..|::|||.:||.|||
  Fly   408 KGNVEYVAKAIHAAVT 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GOT1NP_002070.1 PTZ00376 5..412 CDD:240390 229/406 (56%)
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 227/404 (56%)
Aminotran_1_2 49..418 CDD:278580 214/373 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143146
Domainoid 1 1.000 436 1.000 Domainoid score I567
eggNOG 1 0.900 - - E1_COG1448
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1571
Inparanoid 1 1.050 468 1.000 Inparanoid score I1532
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62835
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 1 1.000 - - FOG0000707
OrthoInspector 1 1.000 - - oto89204
orthoMCL 1 0.900 - - OOG6_100337
Panther 1 1.100 - - LDO PTHR11879
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2019
SonicParanoid 1 1.000 - - X428
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.800

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