Sequence 1: | NP_001376612.1 | Gene: | GOLGA3 / 2802 | HGNCID: | 4426 | Length: | 1498 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001024127.1 | Gene: | eea-1 / 179832 | WormBaseID: | WBGene00011696 | Length: | 1205 | Species: | Caenorhabditis elegans |
Alignment Length: | 1378 | Identity: | 264/1378 - (19%) |
---|---|---|---|
Similarity: | 531/1378 - (38%) | Gaps: | 402/1378 - (29%) |
- Green bases have known domain annotations that are detailed below.
Human 273 LKQNRSSAASVVSEISLSPDTDDRLENTSLAGDSVSEVDGNDSDSSSYSSASTRGTYGILS---- 333
Human 334 --------------------KTVGTQDTPYMVNGQEIPADTLGQFPSIKDVLQAAAAEHQDQGQE 378
Human 379 VNGEVRSRRDSICSSVSLESSAAETQ----EEMLQVL--------KEKMRLEGQLEALSLEASQA 431
Human 432 LKEKAELQAQLAALSTKLQAQVECSHSSQQRQDSLSSEVDTLKQSCWDLERAMTDLQNMLEAKNA 496
Human 497 SLASSNNDLQVAEEQY---QRLMAKV-----------------------------EDMQRSMLSK 529
Human 530 DNTVHDLRQQMTALQSQLQQ-----VQLER----------------TTLTSKLKASQAEISSLQS 573
Human 574 VRQWYQQQLALAQ-----------------EARVRLQGEMAHIQVGQMTQAGLLEHLKLENVSLS 621
Human 622 QQLTETQHRSMKEKGRIAAQLQGIEADMLDQEAAFM-----QIQEAKTMVEEDLQRRLEEFEGER 681
Human 682 ERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTL----TQEALQSREQS--- 739
Human 740 -LDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKE-----ELDRGARR 798
Human 799 LEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKD 863
Human 864 QLISE----LKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHRE--VAQVRQHMADLEGHL 922
Human 923 QSAQKERDEMETHLQSLQFDKEQMVAVTEAN---EALKKQIEELQQEARKAITEQKQKMRRLGSD 984
Human 985 LTSAQKEMKTKHKAY-----------ENAVGILSRRLQEALAAKEAADAELGQLRAQGGSSDSSL 1038
Human 1039 ALHERIQALEAELQAVSHS---KTLLEKELQEVIALTSQELEESREKVLELEDELQ-ESRGFRKK 1099
Human 1100 IKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLNLQVQAVLQRKE 1164
Human 1165 EEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHL 1229
Human 1230 VQKLQA----EADDLQIREGKHSQ---EIAQFQAELAEARAQL------------------QLLQ 1269
Human 1270 KQLDEQL-----------SKQPVGNQEMENLKWEVDQKEREIQSLKQQLDLTEQQGRKELEGLQQ 1323
Human 1324 LLQNVKSELEMAQEDLSMTQKDKFML---------------------QAKVSELKNNMKTLLQQN 1367
Human 1368 QQLKLDLRRGAAKTRKEPKGEASSSNP-------ATPIKIPDCPV-------PASLLEELLRPPP 1418
Human 1419 AVSKEPLKNLNSC 1431 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GOLGA3 | NP_001376612.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..118 | ||
Interaction with GOPC. /evidence=ECO:0000269|PubMed:15951434 | 121..141 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 166..195 | ||||
Golgi-targeting domain | 172..257 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 216..325 | 14/51 (27%) | |||
SMC_prok_B | <393..743 | CDD:274008 | 84/444 (19%) | ||
Smc | 630..1358 | CDD:224117 | 162/826 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 789..809 | 7/24 (29%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 974..993 | 2/18 (11%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1376..1400 | 3/30 (10%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1440..1498 | ||||
eea-1 | NP_001024127.1 | SMC_prok_B | <98..468 | CDD:274008 | 76/412 (18%) |
Smc | 329..1077 | CDD:224117 | 177/898 (20%) | ||
FYVE_EEA1 | 1141..1203 | CDD:277269 | 11/66 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |