DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GOLGA2 and GM130

DIOPT Version :10

Sequence 1:NP_001353173.2 Gene:GOLGA2 / 2801 HGNCID:4425 Length:1029 Species:Homo sapiens
Sequence 2:NP_611642.2 Gene:GM130 / 37524 FlyBaseID:FBgn0034697 Length:795 Species:Drosophila melanogaster


Alignment Length:1021 Identity:240/1021 - (23%)
Similarity:404/1021 - (39%) Gaps:273/1021 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    11 PAMSEETRQSKLAAAKKKLREYQQRNSPGVPTGAKKKKKIKNGSNPETTTSGGCHSPEDIQDILK 75
            |..:::.:..|||||:|||:|||||.|                                      
  Fly     2 PDDTQDAKAQKLAAARKKLKEYQQRAS-------------------------------------- 28

Human    76 VLVSDLNRSNGVALPPLDKWKTPKDNAATLQPSDDTVLPGGVPSPGASLTSMAASQNHDADNVPN 140
                   .:||                                .|||.....|.:|:|       
  Fly    29 -------NNNG--------------------------------QPGAEEPVAATTQSH------- 47

Human   141 LMDETKTFSSTESLRQLSQQLNGLVCESATCVNGEGPASSANLKDLESRYQQLAVALDSSYVTNK 205
                :.|.|.:.:|.:.|        :|...|||.|...:       ...:|.|:...:||..  
  Fly    48 ----SSTVSISSNLSERS--------DSEINVNGGGAGGT-------QPPEQSALPTAASYFA-- 91

Human   206 QLNITIEKLKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHA 270
                       ||:.             :..|.|.:...  :|.|.::::|||:|...|...:.|
  Fly    92 -----------QNES-------------EHNGGLADASS--LQAIQVIIAEKAQLNAELTKVRLA 130

Human   271 ARQKEGESEDLASRLQYSRRRVGELER-ALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSN 334
            .|::|.|.|:|......::.|:.:|:: .....||.:::..:|.:        |:.:|.::....
  Fly   131 CRERELELEELRILKDQNQLRLEQLQQHCQDQQSTGEQQRQQYAQ--------LQAQLLQSQAQI 187

Human   335 EDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQ-----QLQQ 394
            :|.:...:|||.:|:.....:..:|..|.:...:|||.:|.|:|.|........|:     |.|.
  Fly   188 KDQQSHLNELEAQLKQSNQHQEELQQQLSQKSNELEMAQLKLRQLSDESSVTTDNRVESLVQTQY 252

Human   395 AMEERAQ-LEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSR 458
            ..|::.: |:|.:||:.:...|...:...|.::..||.|...:|..::||.:::|||.:...:..
  Fly   253 MYEQQIRDLQAMVGQLTQDKEQAAGQYQNYVQHQSGEIAKLNERNTELSEVLNSLRERERQLVEH 317

Human   459 VQELETSLAE---LRNQMAEPPPPEPPAGPSEVEQQLQAEAEHLRKELEGL-----AGQLQAQVQ 515
            |..||..:.:   |:.|..|....:|....:..::.|:.|...|::::|..     ..||:.:.|
  Fly   318 VGALERDIQKNISLQAQFKEASQVQPSKEETSEQKALKDELAVLKEQIENFEFERHEFQLKIKSQ 382

Human   516 DNEGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQ 580
            |:: |...|...:|...:|||   |..||.: :.::|.||::|:...||||:||.|:|.||.|||
  Fly   383 DDQ-LQLKNSALDELEKQLER---LQAEQPD-QSKLLATMESDKVAASRALTQNVEMKNQLDELQ 442

Human   581 SGFVKLTNENMEITSALQSEQHVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGH 645
            ..||:|||:..|:...|.||:...||:.:....:::||...:|..:.|.:|...|..:       
  Fly   443 QRFVQLTNDKAELVIRLDSEEFANREIRQNYNSMEQKLQANEERFKFKDEEMIRLSHE------- 500

Human   646 LQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQ 710
                         ..|:...||:||.|| |:|:..||:.....|       ||::...|...:|:
  Fly   501 -------------NVELQRQQLMLQQQL-DRLRHYEAKAYHAGE-------ETEKENGADAPENE 544

Human   711 QLRAQLSLMAH-------PGEGDGLDREEEEDEEEEEEEAVAVPQPMP-SIPEDLESREAMVAFF 767
            ...|:...:.|       ....||...:.:.|...|.....|.....| ..|.|.....:     
  Fly   545 AEEAKEVGLLHNHSHDHSHQHSDGHCHDNDHDHSHEHNHHNAGDHGHPHDHPHDHTHDHS----- 604

Human   768 NSAVASAEEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGETHRALQGAM 832
            :|.....:.:.....||....    |:.|..|.:|:                           |:
  Fly   605 HSHPHDHQHDHPHDHGQNHAH----RQAAETLPTAE---------------------------AV 638

Human   833 EKLQSRFMELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISR 897
            |:|||||..|:.:.|||.|....|||..:||..||:||||||||||:||.:||:|..||...:..
  Fly   639 ERLQSRFTTLISQVADLTEEKHSLEHLVLQLQSETETIGEYIALYQTQRRMLKQREYEKAAQMRL 703

Human   898 LAQDKEEMKVKLLELQELVLRLVGDRNEWHGRFLAAAQNPADEPTSGAPAPQELGAANQQGDLCE 962
            |..::|:::.|:..|.:||:.|                        |...|.:...|.|      
  Fly   704 LQAEREQLREKIEALNKLVVSL------------------------GVELPADAAQAKQ------ 738

Human   963 VSLAGSVEPAQGEAREGSPRDNPTAQQIM----QLLREMQNPRERP 1004
                    |......|.:|.:...:|||:    .::.|::...|:|
  Fly   739 --------PEAAAGSEHTPGEGENSQQIINKIQDIISEIKENTEQP 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GOLGA2NP_001353173.2 SMC_prok_B <180..472 CDD:274008 65/301 (22%)
GOLGA2L5 408..935 CDD:464485 146/542 (27%)
GM130_C 980..1025 CDD:465957 7/29 (24%)
GM130NP_611642.2 Smc <110..>411 CDD:440809 76/313 (24%)
GOLGA2L5 267..725 CDD:464485 145/526 (28%)

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