DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GOLGA2 and CG13366

DIOPT Version :9

Sequence 1:NP_001353173.2 Gene:GOLGA2 / 2801 HGNCID:4425 Length:1029 Species:Homo sapiens
Sequence 2:NP_001036254.1 Gene:CG13366 / 31004 FlyBaseID:FBgn0025633 Length:1094 Species:Drosophila melanogaster


Alignment Length:895 Identity:188/895 - (21%)
Similarity:334/895 - (37%) Gaps:232/895 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    15 EETRQSKLAAAKKKLREYQQRNS--PGVPTGAKKKKKIKNGSNPETTTSGGCHSPEDIQDILK-- 75
            |:.:|..:.||..|...:|:..|  .||..|.:....:.|....:....         |.:|:  
  Fly    49 EQQQQHSITAATTKFYAHQETASYERGVDVGDEGALLLTNQQQEQRRQQ---------QQLLQQP 104

Human    76 ---VLVSDLNRSNGVALPPLDKWKTPKDNAATLQPSDDTVLPGGVPSPGASLTSMAASQNHDADN 137
               .|....::..|...|.|...:.|..||.........::......|.||.|..:::.|.:.:|
  Fly   105 QSNTLPQKKSKLKGQKQPKLLPVQQPHSNAPEPHDPQQPLMTSLAAVPQASATGSSSNSNINNNN 169

Human   138 VPNLMDETKTFSSTESLRQLSQQLNGLVCESATCVNGEGPASSAN--LKDLESRYQQLAVA--LD 198
            ....:.:..  ::..:.....|||......:||..:..|..:||:  :....:....:|||  ..
  Fly   170 ALAALQDGG--AAAAAAADFYQQLAAAATATATATSANGSNTSADSPVSSFPAAAAAVAVAAVAA 232

Human   199 SSYVTNKQLNITIEKLKQQNQEITDQLEEEKKECHQKQGALR-EQLQVHIQTIGIL--VSEKAEL 260
            |||...:|....:...:||.|.:  :...:.:|.|::....| ||:|:..:...:|  .||.|:|
  Fly   233 SSYQQQQQQQQLLNNEQQQQQLL--EANNKMQELHKQMERFRSEQMQLETRITELLPYQSEVAKL 295

Human   261 QTALAHTQHAARQKE-------GESEDLASRL-----------------QYSRR----------- 290
            :..|...|....:.:       .|:|.|.:||                 |.|:|           
  Fly   296 KGDLVKMQSLQEKSQMEIGNLKYENESLRNRLRDVVNSPLSDAEKHQIIQDSQRLHSSAPASIAL 360

Human   291 ---------------------------------RVGELE--------------RALSAVSTQQKK 308
                                             ::.::|              :.|:.:.||...
  Fly   361 PSTHDAHDGTPCLTPDWDKQSSSSEISVACLQDKIIQMEETHYSTNEELQATLQELADLQTQLTD 425

Human   309 ADRYNKELTKERDALRLELYKNTQS-NE--------------DLKQ-----EKSELEEKLRVLV- 352
            ....|:.|.:|:|.|...|.:.|:. ||              |.||     ..||.|:||..|: 
  Fly   426 TQTENERLAEEKDVLFQSLCRQTEKLNESRTQISTLQELLLRDTKQPAPEVSASEREQKLLDLIK 490

Human   353 ---TEKAGMQLNLEELQKKL-------EMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLG 407
               .|:..:.|..|||..:|       |..:|.||:...|....|:  ||..|..||.|.||...
  Fly   491 TSQEEREAVLLKQEELGAELAEMKQAREAGQLELQRQRERIALLDS--QLDAANAERRQGEAQFS 553

Human   408 QVMESVRQLQMERDKYA---ENLKG-----ESAMWRQRMQQMSEQVHTLREEKECSMSRVQELET 464
            |.||.:.|..:|..:.:   ||.:.     |:.:.|.....:||.:...|:||:.       ||.
  Fly   554 QAMEEISQRAIEISRLSTLLENARSKIEELEADLSRGDKTDLSEVLDVARKEKDA-------LEE 611

Human   465 SLAELRNQMAEPPPPEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEE 529
            .:|||::|.:                :.|||...||.:|.||..:.:. |::|            
  Fly   612 RVAELQDQCS----------------RSQAELRRLRDQLSGLTEECKV-VKNN------------ 647

Human   530 RLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEIT 594
                    |:......|.|   ||.:|.|:..|:   .:.:.|:|::||||........:..::.
  Fly   648 --------AKCAVSHLEYR---LEQLQRDKDKIA---GEWQALEERVAELQVQCKCHQEDKAQLQ 698

Human   595 SALQSEQHVKRELGKKLGELQEKLSE----LKETVELKSQEAQSLQQQRDQYLGHLQ-------Q 648
            |.|...|       :.||::|.||.|    |.:..:|:.:||:..||.:...|..::       :
  Fly   699 SLLAETQ-------RHLGDVQLKLGEAECRLDQETQLRRKEAEEWQQFQADLLMTVRVANDFKTE 756

Human   649 YVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQN---- 709
            .::|.:||..:.:....::.|..|.:::|.:|:.|   .:|..:..|...|..:|.||:::    
  Fly   757 ALSAREQLVLDNKTQKEKIRLLEQQLEKLTKQQMQ---QSETPQSVLSTVQREMEMATRRSKLSF 818

Human   710 --QQLRAQLSLMAHPGEGDGLDREEEEDEEEEEEEAVAVPQPMPSIPEDL 757
              |..|..:..:.     :.::..:.:.:.:|.|...:....:.|...||
  Fly   819 SRQDSRLSVKTLI-----ESIENNKAQGKADESESHYSSTSSLNSGTPDL 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GOLGA2NP_001353173.2 Smc <183..473 CDD:224117 92/415 (22%)
GOLGA2L5 408..935 CDD:405716 81/375 (22%)
GM130_C 980..1025 CDD:408816
CG13366NP_001036254.1 Ead_Ea22 554..684 CDD:290646 42/179 (23%)
CH 992..1092 CDD:237981
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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