Sequence 1: | NP_663595.1 | Gene: | Rrp9 / 27966 | MGIID: | 2384313 | Length: | 475 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014529.1 | Gene: | U3-55K / 3346176 | FlyBaseID: | FBgn0053505 | Length: | 484 | Species: | Drosophila melanogaster |
Alignment Length: | 483 | Identity: | 202/483 - (41%) |
---|---|---|---|
Similarity: | 293/483 - (60%) | Gaps: | 48/483 - (9%) |
- Green bases have known domain annotations that are detailed below.
Mouse 17 PGAAPVAGKRRRKVDSAADRGK--SKGG--GKM------------------NEEISSDSE----- 54
Mouse 55 ----SESLAPRKTEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKED 115
Mouse 116 VLEQRGRLQKSVAKEIQAPAPTDIRVLRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGR- 179
Mouse 180 --KLHVIPRAKKGAQGQPAGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRD 242
Mouse 243 AVSGLAFRKGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTV 307
Mouse 308 RVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLHGEPG 372
Mouse 373 LEQPFWVSSVAALLNTDLVATGSHNARVRLWQCGEGFRQLDPLCDIPLVGFINSLKFSSAGDFLV 437
Mouse 438 AGVGQEHRLGRWWRIKEARNSVCIIPLR 465 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp9 | NP_663595.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..75 | 26/88 (30%) | |
Nuclear localization signal. /evidence=ECO:0000255 | 8..40 | 9/24 (38%) | |||
WD40 | <136..403 | CDD:225201 | 123/269 (46%) | ||
WD40 | 139..439 | CDD:238121 | 136/302 (45%) | ||
WD 1 | 144..183 | 13/41 (32%) | |||
WD40 repeat | 149..197 | CDD:293791 | 14/50 (28%) | ||
WD 2 | 197..236 | 15/38 (39%) | |||
WD40 repeat | 203..239 | CDD:293791 | 13/35 (37%) | ||
WD 3 | 239..278 | 25/38 (66%) | |||
WD40 repeat | 244..280 | CDD:293791 | 22/35 (63%) | ||
WD 4 | 281..320 | 25/38 (66%) | |||
WD40 repeat | 287..320 | CDD:293791 | 20/32 (63%) | ||
WD 5 | 322..360 | 19/37 (51%) | |||
WD40 repeat | 327..363 | CDD:293791 | 16/35 (46%) | ||
WD 6 | 374..413 | 17/38 (45%) | |||
WD40 repeat | 379..421 | CDD:293791 | 17/41 (41%) | ||
WD 7 | 419..460 | 23/40 (58%) | |||
WD40 repeat | 424..449 | CDD:293791 | 13/24 (54%) | ||
U3-55K | NP_001014529.1 | Upf2 | 55..>125 | CDD:281974 | 29/75 (39%) |
WD40 | <150..484 | CDD:225201 | 152/333 (46%) | ||
WD40 | 156..416 | CDD:295369 | 123/264 (47%) | ||
WD40 repeat | 163..203 | CDD:293791 | 13/39 (33%) | ||
WD40 repeat | 218..254 | CDD:293791 | 13/35 (37%) | ||
WD40 repeat | 259..295 | CDD:293791 | 22/35 (63%) | ||
WD40 repeat | 302..336 | CDD:293791 | 20/33 (61%) | ||
WD40 repeat | 342..379 | CDD:293791 | 16/36 (44%) | ||
WD40 repeat | 391..431 | CDD:293791 | 16/39 (41%) | ||
WD40 repeat | 436..461 | CDD:293791 | 13/24 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167837948 | |
Domainoid | 1 | 1.000 | 59 | 1.000 | Domainoid score | I10657 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0299 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3452 | |
Inparanoid | 1 | 1.050 | 358 | 1.000 | Inparanoid score | I2211 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1798 |
OMA | 1 | 1.010 | - | - | QHG54739 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004346 | |
OrthoInspector | 1 | 1.000 | - | - | oto92857 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102033 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19865 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1935 |
SonicParanoid | 1 | 1.000 | - | - | X3065 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.740 |