Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021334866.1 | Gene: | dscama / 568643 | ZFINID: | ZDB-GENE-050310-7 | Length: | 2025 | Species: | Danio rerio |
Alignment Length: | 2006 | Identity: | 611/2006 - (30%) |
---|---|---|---|
Similarity: | 933/2006 - (46%) | Gaps: | 257/2006 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DLHSLFKAILILYVIRAETSQFVNGLDLQGPIFLHEPPHRVEFSNNSGGLIECSGHGSPPPEVEW 66
Fly 67 ----------TP----IPPQQDMVFQLSNGSMMFYPFTAEKYRHEVHATVYRCKLRNLVGTVLSR 117
Fly 118 EVHVRGVVNQKYAVQVHDEYVMTGNTAVLKCQVPSYMSEFVLVTAWVQDTGMHLYPNTDIGGKYT 182
Fly 183 VLSNGELYINNAGPNDAYKSYTCRTVNRLTGEVQISTYPGRIIVTEPKGMVQPRINVEKHSMRHV 247
Fly 248 VLNGQTTLPCIAQGHPVPTYRWFKEENEQLLPLQLSERITIVSAGLLKITKARLEDSGKYLCWVN 312
Fly 313 NTAGEETIQVSLTVTAPLTAHLQPQVQTVDVDKDAQFQCIVSGHPVHDVNWLHDGKPI-----LR 372
Fly 373 DNRVEILTDPPRLIIKKVQKEDPGMYQCFVSNEWEQIQSTAELQLGDASPELLYWFSEQTLQPGP 437
Fly 438 TVSLKCVATGNPLPQFTWSLDGFPIPDSSRFLVGQYVTIHDDVISHVNISNVKEEDGGEYTCTAQ 502
Fly 503 NAIGKVSHSAKVNIYGLPYIREMPKITGISGSDLIVKCPVAGYPIDKIHWERDGQTLPINRRQRA 567
Fly 568 Y-NNGTLIIEQLQRLEDAGTYTCMAQNKQKQTSRRNVEIQVLVPPKIMPIQAMTNMLREGMRAAI 631
Fly 632 SCQILEGDLPVSFRWERNGKPLIGTGNEVFRRLDEYSASLVIEHISSDHSGNYTCIASNVAGTER 696
Fly 697 FTVPLTVNVPPKWILEPKDSSAQAGADVLLHCQSSGYPTPTITWKKAIGPTPGEYKDFLYEP--T 759
Fly 760 VQLFPNGTIFFKKISKESQGHFLCEAKNNIGSGVSKVIFLKVNVPAHFQTKTKQISVAKGKQVHV 824
Fly 825 QCNVQGDNPIDFKWKIQATQQYLDESLDS---RYTIRDQVLDDGMVSELGISHTYRQDTGIYICQ 886
Fly 887 ASNAFGQDEMSIQLIVQEVPEQPKNLRINSQQSRSLQLTWSQPFAGNSPIEEYHIYYKQISDIWQ 951
Fly 952 NAEHL-TIAGAQTVINIQQLRPAKAYHIRMSAENKLGASEFSEVVQVTTLEEVPSGPPLAVRAEP 1015
Fly 1016 KSSTEIFVTWDAPERDHWNGILLGYYVGYQMSLTPEDKEVNPTQGFSFKTVEVRSHFGGET---V 1077
Fly 1078 LANLNKFTQYHVIVQAYTSQGSGPPSKEIAVQTMEDVPSSPPESPQCDVLGSTSIYITWSPPDID 1142
Fly 1143 GQNGKIKGYKVFY---ISVDELYETDPEVVKSTNQY---VTIENLRKYTNYTVWVLAYTKVGDGM 1201
Fly 1202 KTKPFYCRTHEDVPSAPQAIKAIPASSSKIIISWLPPDLPNGDITGYTFY--------MSMLEGG 1258
Fly 1259 REEGTHKRLLGPFVEMHETVRTQESATYQFWLTASTKMGEGEKTQVVTVPPNNKVPARIVSFSQR 1323
Fly 1324 IVTPWKEHLELPCRKVGAPAPVTIWRQDGHNMETS---ARKTIAKNGTLYMKECQASDAGNYTCS 1385
Fly 1386 VENTWGKDEIVYNIVVKVPPEAPNLTVINAYTDSLLLEWMDNSHGGSPILGYVINYKRDNGD-WE 1449
Fly 1450 ELQVDSKTTSHLLTNLWCGTRYQLYITAYNKIGTGLPCDIVNSYTKGNPPVQPKHSQMITN-NST 1513
Fly 1514 SVTCWLDSWGDGGCGILYFMIESRVYGRSSWAVVSNHIPPTERIYTVSDLVPGTKYQLKVTAHNN 1578
Fly 1579 AGSTTAIYNFTTLSTQGVIYNNDHST-----------PVSHLSDLPFYANFKLLLPICFSLLMLL 1632
Fly 1633 ALIGAALFLRKR-------KLASQARLASSSMSESPSLANLQNKQN----------RDQQYLAVR 1680
Fly 1681 CNPGTSAPRGS---NSNDSGSFGKAEGNEYIEDICPYATFQLNKQTYSESSYSGNVYSGPYHSVR 1742
Fly 1743 GSFVYHDVKPESYHSKEPEYTKVR-RKVG-----------RLRDPH------------------- 1776
Fly 1777 --SESQESD----NPG-STDSEVRKILTLHIPITEYDTLGSESDNDVSARALNSAKY-------- 1826
Fly 1827 -----RAQRDTQDETSSSSETTP--TSMTR-KSKPP----------FAARKGGKPG 1864 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | 20/106 (19%) |
Ig strand A | 32..35 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 41..45 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 48..57 | CDD:409353 | 3/8 (38%) | ||
Ig strand D | 75..78 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 83..88 | CDD:409353 | 0/4 (0%) | ||
Ig strand F | 101..109 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 112..124 | CDD:409353 | 4/11 (36%) | ||
Ig | 235..326 | CDD:416386 | 32/90 (36%) | ||
Ig strand A | 235..238 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 244..248 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 251..258 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 266..271 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 276..279 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 285..289 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 292..298 | CDD:409353 | 4/5 (80%) | ||
Ig strand F | 305..313 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 316..326 | CDD:409353 | 2/9 (22%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 22/92 (24%) | ||
Ig strand B | 347..351 | CDD:409549 | 0/3 (0%) | ||
Ig strand C | 360..364 | CDD:409549 | 0/3 (0%) | ||
Ig strand E | 383..387 | CDD:409549 | 1/3 (33%) | ||
Ig strand F | 397..402 | CDD:409549 | 3/4 (75%) | ||
Ig strand G | 410..413 | CDD:409549 | 1/2 (50%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 35/93 (38%) | ||
Ig strand B | 439..443 | CDD:409548 | 3/3 (100%) | ||
Ig strand C | 452..456 | CDD:409548 | 1/3 (33%) | ||
Ig strand E | 482..486 | CDD:409548 | 1/3 (33%) | ||
Ig strand F | 496..501 | CDD:409548 | 2/4 (50%) | ||
Ig strand G | 509..512 | CDD:409548 | 1/2 (50%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 33/87 (38%) | ||
Ig strand B | 536..540 | CDD:409550 | 0/3 (0%) | ||
Ig strand C | 549..553 | CDD:409550 | 1/3 (33%) | ||
Ig strand E | 571..575 | CDD:409550 | 3/3 (100%) | ||
Ig strand F | 586..591 | CDD:409550 | 2/4 (50%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 30/92 (33%) | ||
Ig strand A | 611..613 | CDD:409353 | 1/1 (100%) | ||
Ig strand A' | 620..624 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 627..636 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 641..648 | CDD:409353 | 3/6 (50%) | ||
Ig strand C' | 650..652 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 659..664 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 668..675 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 682..690 | CDD:409353 | 6/7 (86%) | ||
Ig strand G | 693..702 | CDD:409353 | 0/8 (0%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 32/96 (33%) | ||
Ig strand B | 724..728 | CDD:409546 | 2/3 (67%) | ||
Ig strand C | 737..741 | CDD:409546 | 2/3 (67%) | ||
Ig strand E | 766..770 | CDD:409546 | 1/3 (33%) | ||
Ig strand F | 780..785 | CDD:409546 | 2/4 (50%) | ||
Ig strand G | 794..797 | CDD:409546 | 2/2 (100%) | ||
Ig | 818..904 | CDD:416386 | 26/88 (30%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 0/6 (0%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 1/3 (33%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 3/5 (60%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 3/7 (43%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 4/9 (44%) | ||
FN3 | 906..999 | CDD:238020 | 32/93 (34%) | ||
FN3 | 1006..1110 | CDD:238020 | 40/106 (38%) | ||
fn3 | 1117..1203 | CDD:394996 | 27/91 (30%) | ||
FN3 | 1215..1307 | CDD:238020 | 31/99 (31%) | ||
Ig | <1334..1401 | CDD:416386 | 26/69 (38%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 3/6 (50%) | ||
FN3 | 1405..1494 | CDD:238020 | 32/89 (36%) | ||
FN3 | 1499..1580 | CDD:238020 | 25/81 (31%) | ||
dscama | XP_021334866.1 | Ig | 124..217 | CDD:325142 | 31/97 (32%) |
I-set | 236..311 | CDD:254352 | 29/79 (37%) | ||
IG_like | 321..402 | CDD:214653 | 19/84 (23%) | ||
I-set | 408..502 | CDD:333254 | 35/93 (38%) | ||
IGc2 | 524..579 | CDD:197706 | 24/54 (44%) | ||
Ig | 614..679 | CDD:319273 | 23/65 (35%) | ||
Ig_DSCAM | 708..787 | CDD:143211 | 27/78 (35%) | ||
Ig | 805..898 | CDD:325142 | 29/92 (32%) | ||
FN3 | 894..988 | CDD:238020 | 32/94 (34%) | ||
FN3 | 995..1092 | CDD:238020 | 40/106 (38%) | ||
fn3 | 1100..1186 | CDD:306538 | 27/90 (30%) | ||
fn3 | 1199..1282 | CDD:306538 | 29/93 (31%) | ||
Ig | 1312..1377 | CDD:319273 | 22/64 (34%) | ||
fn3 | 1405..1471 | CDD:306538 | 24/65 (37%) | ||
FN3 | 1492..1563 | CDD:238020 | 23/72 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I4915 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H74393 | |
Inparanoid | 1 | 1.050 | 917 | 1.000 | Inparanoid score | I353 |
OMA | 1 | 1.010 | - | - | QHG47134 | |
OrthoDB | 1 | 1.010 | - | - | D10185at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003568 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6394 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101656 | |
Panther | 1 | 1.100 | - | - | O | PTHR10075 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4969 |
SonicParanoid | 1 | 1.000 | - | - | X1391 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.870 |