Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009305142.1 | Gene: | sdk2b / 564922 | ZFINID: | ZDB-GENE-030131-8203 | Length: | 2256 | Species: | Danio rerio |
Alignment Length: | 1925 | Identity: | 427/1925 - (22%) |
---|---|---|---|
Similarity: | 676/1925 - (35%) | Gaps: | 558/1925 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 298 KARLEDSGKYLCWVNNTAGEETIQVSLTVTAPLTA---HLQPQVQTVDVDKDAQFQ-------CI 352
Fly 353 VSGHPVHDVNWLHDGKPILRDNRVEILTDPPRLIIKKVQKEDPGMYQCFVSNE-WEQIQSTAELQ 416
Fly 417 LGDASPELLYWFSE----QTLQPG-----PTVSLKCVATGNPLPQFTWSLDGFPIPDSSRFLV-- 470
Fly 471 --------------GQYVTIHDDVISHVNISNVKEEDGGEYTCTAQNAIGKVSHSAKVNIYGLPY 521
Fly 522 IREMPKITG-ISG-SDLIVKCPVAGYPIDK--IHWERDGQTL-----PINRRQRAYNNGTLIIEQ 577
Fly 578 LQRLEDAGTYTCMA--QNKQKQTSRRNVEIQVLVPPKIM--PIQAMTNMLREGMRAAISCQILEG 638
Fly 639 DLPVSFR--------WERNGKPLIGTGNEVFRRLDEYSASLVIEHISSDHSGNYTCIASNVAGTE 695
Fly 696 RFTVPLTV-NVPPKWILEPKDSSAQAGADVLLHCQSSGYPTPTITWKKAIGPTPGE---YKDFLY 756
Fly 757 EPTVQLFPNGTIFFKKISKESQGHFLCEAKNNIG---SGVSKVIFLKVNV--PAHFQTKTKQISV 816
Fly 817 AKGKQVHVQCNVQGDNPID--FKW----KIQATQQYLDESLDSRYTIRDQVLDDGMVSELGISHT 875
Fly 876 YRQDTGIYICQASNAFGQDEMSIQLIVQEVPEQPKN--LRINSQQSRSLQLTWSQPFAGNSPIEE 938
Fly 939 YHIYYKQISDIWQNAEHLTIAGA-----QTVINIQQLRPAKAYHIRMSAENKLGASEFS-EVVQV 997
Fly 998 TTLEEVPSGPPLAVRAEPKSSTEIFVTWDAPERDHWNGILLGYYVGYQMSLTPEDKEVNPTQGFS 1062
Fly 1063 FKTV---EVRSHFGGETVLANLNKFTQYHVIVQAYTSQGSGPPSKEIAVQTMEDVPSSPPESPQC 1124
Fly 1125 DVLGSTSIYITWSPPDIDGQNGKIKGYKVFYISVDELYETDPEVVKSTNQYVT----IENLRKYT 1185
Fly 1186 NYTVWVLAYTKVGDGMKTKPFYCRTHEDVPSAPQAIKAIPASSSKIIISWLPPDLPNGDITGYTF 1250
Fly 1251 YMSMLEGGREEGTHKRLLGPFVEMHETVRTQESATYQFWLTASTKMGEGEKTQVVTV-------- 1307
Fly 1308 --PPNN----------------------------KVPARI---------VSFSQRIVTPWKEHLE 1333
Fly 1334 L--------------------------PCRKVG--------APAPVTI----------------- 1347
Fly 1348 WRQDGHNMETSARKTIAKNG--------------------------TLYMKECQASD---AGNYT 1383
Fly 1384 CSVENTWGKDEIVYNIVVKVPPEAP-NLTVINAYTDSLLLEWMD--NSHGGSPILGYVINYKRDN 1445
Fly 1446 GD-----WEELQVDSKTT-SHLLTNLWCGTRYQLYITAYNKIGTGLPC----------------- 1487
Fly 1488 ---------------------------------------------DIVNS----YT--------- 1494
Fly 1495 --------------------------KGNPPVQPKHSQMITNNSTSVTCWLDSWGDGGCG---IL 1530
Fly 1531 YFMIESRVYGRSSWAVVSNHIPPTERIYTVSDLVPGTKYQLKVTAHNNAGSTTAIYNFTTLSTQG 1595
Fly 1596 VIYNNDHSTPVSHLSDLPFYANFKLLLPICFSLLMLLA------------LIGAALFLRKRKLAS 1648
Fly 1649 QARLASSSM----SESPSLANLQNKQNRDQQYLAVRCNPGTSAPRGSNSNDSGSFGKAEGNEYIE 1709
Fly 1710 DICPYATFQLNKQTYSESSYSGNVYSGPYHSVRGSFVYHDVKPESYHSKEPEYTKVRRKVGRLRD 1774
Fly 1775 -----PHSESQESDNPG--------STDSEVRKILTLHIP--------ITEYDTLGSESDNDVSA 1818
Fly 1819 RALNSA---------KYRAQRDTQDETS--SSSETTPTSM 1847 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | |
Ig strand A | 32..35 | CDD:409353 | |||
Ig strand A' | 41..45 | CDD:409353 | |||
Ig strand B | 48..57 | CDD:409353 | |||
Ig strand D | 75..78 | CDD:409353 | |||
Ig strand E | 83..88 | CDD:409353 | |||
Ig strand F | 101..109 | CDD:409353 | |||
Ig strand G | 112..124 | CDD:409353 | |||
Ig | 235..326 | CDD:416386 | 7/27 (26%) | ||
Ig strand A | 235..238 | CDD:409353 | |||
Ig strand A' | 244..248 | CDD:409353 | |||
Ig strand B | 251..258 | CDD:409353 | |||
Ig strand C | 266..271 | CDD:409353 | |||
Ig strand C' | 276..279 | CDD:409353 | |||
Ig strand D | 285..289 | CDD:409353 | |||
Ig strand E | 292..298 | CDD:409353 | 427/1925 (22%) | ||
Ig strand F | 305..313 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 316..326 | CDD:409353 | 2/9 (22%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 20/98 (20%) | ||
Ig strand B | 347..351 | CDD:409549 | 0/10 (0%) | ||
Ig strand C | 360..364 | CDD:409549 | 0/3 (0%) | ||
Ig strand E | 383..387 | CDD:409549 | 1/3 (33%) | ||
Ig strand F | 397..402 | CDD:409549 | 2/4 (50%) | ||
Ig strand G | 410..413 | CDD:409549 | 1/2 (50%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 28/118 (24%) | ||
Ig strand B | 439..443 | CDD:409548 | 0/3 (0%) | ||
Ig strand C | 452..456 | CDD:409548 | 2/3 (67%) | ||
Ig strand E | 482..486 | CDD:409548 | 1/3 (33%) | ||
Ig strand F | 496..501 | CDD:409548 | 1/4 (25%) | ||
Ig strand G | 509..512 | CDD:409548 | 0/2 (0%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 23/97 (24%) | ||
Ig strand B | 536..540 | CDD:409550 | 0/3 (0%) | ||
Ig strand C | 549..553 | CDD:409550 | 2/5 (40%) | ||
Ig strand E | 571..575 | CDD:409550 | 0/3 (0%) | ||
Ig strand F | 586..591 | CDD:409550 | 2/4 (50%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 21/102 (21%) | ||
Ig strand A | 611..613 | CDD:409353 | 1/1 (100%) | ||
Ig strand A' | 620..624 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 627..636 | CDD:409353 | 0/8 (0%) | ||
Ig strand C | 641..648 | CDD:409353 | 3/14 (21%) | ||
Ig strand C' | 650..652 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 659..664 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 668..675 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 682..690 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 693..702 | CDD:409353 | 1/8 (13%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 28/100 (28%) | ||
Ig strand B | 724..728 | CDD:409546 | 2/3 (67%) | ||
Ig strand C | 737..741 | CDD:409546 | 2/3 (67%) | ||
Ig strand E | 766..770 | CDD:409546 | 1/3 (33%) | ||
Ig strand F | 780..785 | CDD:409546 | 1/4 (25%) | ||
Ig strand G | 794..797 | CDD:409546 | 0/2 (0%) | ||
Ig | 818..904 | CDD:416386 | 24/91 (26%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 0/6 (0%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 2/11 (18%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 0/2 (0%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 0/3 (0%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 2/5 (40%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 3/7 (43%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 3/9 (33%) | ||
FN3 | 906..999 | CDD:238020 | 32/100 (32%) | ||
FN3 | 1006..1110 | CDD:238020 | 28/106 (26%) | ||
fn3 | 1117..1203 | CDD:394996 | 26/89 (29%) | ||
FN3 | 1215..1307 | CDD:238020 | 22/91 (24%) | ||
Ig | <1334..1401 | CDD:416386 | 19/146 (13%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 2/20 (10%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 3/30 (10%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 0/6 (0%) | ||
FN3 | 1405..1494 | CDD:238020 | 27/163 (17%) | ||
FN3 | 1499..1580 | CDD:238020 | 23/83 (28%) | ||
sdk2b | XP_009305142.1 | IGc2 | 69..125 | CDD:197706 | 14/61 (23%) |
IG_like | 70..136 | CDD:214653 | 16/71 (23%) | ||
I-set | 147..230 | CDD:254352 | 23/92 (25%) | ||
Ig | 156..230 | CDD:299845 | 21/83 (25%) | ||
I-set | 242..331 | CDD:254352 | 23/97 (24%) | ||
IGc2 | 260..313 | CDD:197706 | 14/61 (23%) | ||
I-set | 335..424 | CDD:254352 | 20/101 (20%) | ||
Ig | 357..424 | CDD:299845 | 15/68 (22%) | ||
I-set | 429..519 | CDD:254352 | 27/95 (28%) | ||
Ig | 443..519 | CDD:299845 | 23/81 (28%) | ||
I-set | 524..613 | CDD:254352 | 27/107 (25%) | ||
Ig | 529..613 | CDD:299845 | 26/102 (25%) | ||
FN3 | 617..707 | CDD:238020 | 30/95 (32%) | ||
fn3 | 720..803 | CDD:278470 | 27/95 (28%) | ||
FN3 | 821..917 | CDD:238020 | 27/95 (28%) | ||
FN3 | 922..1010 | CDD:238020 | 22/90 (24%) | ||
FN3 | 1020..1114 | CDD:238020 | 12/93 (13%) | ||
fn3 | 1126..1214 | CDD:278470 | 15/87 (17%) | ||
FN3 | 1230..1318 | CDD:238020 | 24/90 (27%) | ||
FN3 | 1328..1421 | CDD:238020 | 5/92 (5%) | ||
FN3 | 1427..1522 | CDD:238020 | 27/111 (24%) | ||
FN3 | 1532..1643 | CDD:238020 | 24/142 (17%) | ||
FN3 | 1653..1746 | CDD:238020 | 19/98 (19%) | ||
FN3 | 1751..1848 | CDD:238020 | 6/17 (35%) | ||
fn3 | 1875..1952 | CDD:278470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |