Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005155702.1 | Gene: | igsf9a / 557459 | ZFINID: | ZDB-GENE-060503-288 | Length: | 1619 | Species: | Danio rerio |
Alignment Length: | 1947 | Identity: | 397/1947 - (20%) |
---|---|---|---|
Similarity: | 632/1947 - (32%) | Gaps: | 691/1947 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 308 LCWVNNT-AGEETIQVSLTVTAPLTAHL-QPQVQTVDVDKDAQFQCIVSGHPVHDVNWLHDG--K 368
Fly 369 PILR------------DNRVEILTDPPRLIIKKVQKEDPGMYQCFV------------SNEWEQI 409
Fly 410 QSTAELQLGDASPELLYWFSEQTLQPGPTVSLKCVATGNPLPQFTWSLDGFPI-PDSSRFLVGQY 473
Fly 474 VTIHDDVISHVNISNVKEEDGGEYTCTAQNAIGKVSHSAKVNIYGLPYIREMPKITGISGS-DLI 537
Fly 538 VKCPVAGYPIDKIH-WERDGQTL----PINRRQRAYNNGTLIIEQLQRLEDAGTYTCMAQNKQKQ 597
Fly 598 TSRRNVEIQVLVPPKIMPIQAMTNMLREGMRAAISCQILEGDLPVS-FRWERNGKPLIGTGNEVF 661
Fly 662 RRLDEY-------SASLVIEHISSDHSGNYTCIASNVAGTERFTVPLTVNV--PPKWILEPKDSS 717
Fly 718 AQ-AGADVLLHCQSSGYPTPTITWKKAIGPTPGEYKDFLYEPTVQLFP---NGTIFFKKISKESQ 778
Fly 779 GHFLCEAKNNIGSGVSKVIFLKVNVPAHFQTKTKQISVAKGKQVHVQCNVQGDNPIDFKWKIQAT 843
Fly 844 QQYLDESLDSRYTIRDQVLDDGMVSELGISHTYRQDTGIYICQASNAFGQDEMSIQLIVQEVPEQ 908
Fly 909 PKNLRINSQQSRSLQLTWSQPFAGNSPIEEYHIYYKQIS-------DIWQNAEHLTIAGAQTVIN 966
Fly 967 IQQLRPAKAYHIRMSAENKLGASEFSEVVQVTTLEEVPSGPPLAVRAEP-------KSSTEIFVT 1024
Fly 1025 WDAP----------------ERDHWNGILLGYYVGYQMSLTPEDKEVNPTQGFSFKTVEVRSHFG 1073
Fly 1074 GETVLANLNKFTQYHVIVQAYTSQGSGPPSKEIAVQT--MEDVPSSP-----PESPQCDVLGSTS 1131
Fly 1132 I-------------YITWS------------PPDIDGQNGKIKGYKVFYISVDELYE--TDPEVV 1169
Fly 1170 KSTNQYVTIENLRKYTNYTVWVLAYTKVGDGMKTKPFYCRTHEDVPSA-PQAIKAIPASSSKIII 1233
Fly 1234 SWLPPDL--------PNGDIT-----GYTFYMSMLEGGREEGTHKRLLGPFVEMHETVRTQESAT 1285
Fly 1286 YQFWLTASTKMGEGEKTQV---VTVPP-NNKVPARIVSFSQRIVTPWKEHLELPCRKVGAPAPVT 1346
Fly 1347 IWRQDGHNMETSARKTI-AKNGTLYMKECQASDAGNYTCSVENTWGKDEIVYNIVVKVPPEAPNL 1410
Fly 1411 TVINAYTDSLLLEWMDNSHGGSPILGYVINYKRDNG----------DWEELQ-------VDSKTT 1458
Fly 1459 SHLLT-----NLW----CGTRYQLYITAYNKI---GTG-----------------------LPC- 1487
Fly 1488 -----DIVNSYTKGNPPVQPKHSQMI--------------------TNNSTSVTCWLDSWGDGGC 1527
Fly 1528 GILY-------------FMIESR--------VY---GRSSWAVVSNHIPPTERIYTVSDL----V 1564
Fly 1565 PGTKYQLKVTAHNNAGSTT-AIYNFTTLSTQGVIYNNDHSTPVSHLSDLPFYANFKLLLPICFSL 1628
Fly 1629 LMLLALIGAALFLRKRKLASQARLASSSMSES---PSLANLQNKQNRDQQY-------------- 1676
Fly 1677 --------------------LAVRCNPGTSAPRGSNSNDSGSFGKAEGNEYIEDICPYATFQLNK 1721
Fly 1722 QTYSESSYSGNVYSGPYHSVR---------------GSFVYHDVKPESYH--------------- 1756
Fly 1757 --SKEPE-------------YTKVRRKVGRLRDPHSESQESDNPGSTDSEVRKILTLHIPITEYD 1806
Fly 1807 TLGSESDNDVSARALNSAKYRAQRDTQDETSSSSETTPTSMTRKSKPPFAARKGGK----PGTSG 1867
Fly 1868 KRHVRSSSGYSSHNEETTFSISNYP--------PNYQDHINPPARFSD----ANDKTKTQTS 1917 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | |
Ig strand A | 32..35 | CDD:409353 | |||
Ig strand A' | 41..45 | CDD:409353 | |||
Ig strand B | 48..57 | CDD:409353 | |||
Ig strand D | 75..78 | CDD:409353 | |||
Ig strand E | 83..88 | CDD:409353 | |||
Ig strand F | 101..109 | CDD:409353 | |||
Ig strand G | 112..124 | CDD:409353 | |||
Ig | 235..326 | CDD:416386 | 7/18 (39%) | ||
Ig strand A | 235..238 | CDD:409353 | |||
Ig strand A' | 244..248 | CDD:409353 | |||
Ig strand B | 251..258 | CDD:409353 | |||
Ig strand C | 266..271 | CDD:409353 | |||
Ig strand C' | 276..279 | CDD:409353 | |||
Ig strand D | 285..289 | CDD:409353 | |||
Ig strand E | 292..298 | CDD:409353 | |||
Ig strand F | 305..313 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 316..326 | CDD:409353 | 2/9 (22%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 26/114 (23%) | ||
Ig strand B | 347..351 | CDD:409549 | 0/3 (0%) | ||
Ig strand C | 360..364 | CDD:409549 | 0/3 (0%) | ||
Ig strand E | 383..387 | CDD:409549 | 1/3 (33%) | ||
Ig strand F | 397..402 | CDD:409549 | 2/4 (50%) | ||
Ig strand G | 410..413 | CDD:409549 | 0/2 (0%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 30/94 (32%) | ||
Ig strand B | 439..443 | CDD:409548 | 1/3 (33%) | ||
Ig strand C | 452..456 | CDD:409548 | 1/3 (33%) | ||
Ig strand E | 482..486 | CDD:409548 | 0/3 (0%) | ||
Ig strand F | 496..501 | CDD:409548 | 2/4 (50%) | ||
Ig strand G | 509..512 | CDD:409548 | 1/2 (50%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 26/92 (28%) | ||
Ig strand B | 536..540 | CDD:409550 | 0/3 (0%) | ||
Ig strand C | 549..553 | CDD:409550 | 0/4 (0%) | ||
Ig strand E | 571..575 | CDD:409550 | 3/3 (100%) | ||
Ig strand F | 586..591 | CDD:409550 | 3/4 (75%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 29/100 (29%) | ||
Ig strand A | 611..613 | CDD:409353 | 0/1 (0%) | ||
Ig strand A' | 620..624 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 627..636 | CDD:409353 | 5/8 (63%) | ||
Ig strand C | 641..648 | CDD:409353 | 3/7 (43%) | ||
Ig strand C' | 650..652 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 659..664 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 668..675 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 682..690 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 693..702 | CDD:409353 | 3/8 (38%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 27/98 (28%) | ||
Ig strand B | 724..728 | CDD:409546 | 0/3 (0%) | ||
Ig strand C | 737..741 | CDD:409546 | 0/3 (0%) | ||
Ig strand E | 766..770 | CDD:409546 | 1/3 (33%) | ||
Ig strand F | 780..785 | CDD:409546 | 1/4 (25%) | ||
Ig strand G | 794..797 | CDD:409546 | 1/2 (50%) | ||
Ig | 818..904 | CDD:416386 | 6/85 (7%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 0/6 (0%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 0/2 (0%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 0/3 (0%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 0/5 (0%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 0/7 (0%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 0/9 (0%) | ||
FN3 | 906..999 | CDD:238020 | 20/99 (20%) | ||
FN3 | 1006..1110 | CDD:238020 | 21/126 (17%) | ||
fn3 | 1117..1203 | CDD:394996 | 14/117 (12%) | ||
FN3 | 1215..1307 | CDD:238020 | 20/108 (19%) | ||
Ig | <1334..1401 | CDD:416386 | 13/67 (19%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 0/6 (0%) | ||
FN3 | 1405..1494 | CDD:238020 | 26/146 (18%) | ||
FN3 | 1499..1580 | CDD:238020 | 22/128 (17%) | ||
igsf9a | XP_005155702.1 | IG_like | 27..110 | CDD:214653 | 23/97 (24%) |
Ig | 35..111 | CDD:299845 | 23/90 (26%) | ||
I-set | 140..221 | CDD:254352 | 31/96 (32%) | ||
IGc2 | 151..212 | CDD:197706 | 26/70 (37%) | ||
Ig | 233..318 | CDD:299845 | 23/85 (27%) | ||
I-set | 233..318 | CDD:254352 | 23/85 (27%) | ||
Ig | <349..402 | CDD:299845 | 17/61 (28%) | ||
IG_like | 423..502 | CDD:214653 | 24/90 (27%) | ||
Ig | 435..498 | CDD:143165 | 20/74 (27%) | ||
FN3 | 507..602 | CDD:238020 | 29/200 (15%) | ||
fn3 | 614..696 | CDD:278470 | 15/110 (14%) | ||
PHA02666 | 1105..>1312 | CDD:222914 | 45/245 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |