Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017211454.1 | Gene: | sdk1b / 555553 | ZFINID: | ZDB-GENE-090311-17 | Length: | 2292 | Species: | Danio rerio |
Alignment Length: | 2099 | Identity: | 461/2099 - (21%) |
---|---|---|---|
Similarity: | 705/2099 - (33%) | Gaps: | 665/2099 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 121 VRGVVNQKYAVQVHDEYVMTGNTAVLKCQVPSYMSEFVLVTAW------VQDTGMHLYPNTDIGG 179
Fly 180 KYTVLSNGELYINNAGPNDAYKSYTCRTVNRLTGEVQISTYPGRIIVTEPKGMVQPRINVEKHSM 244
Fly 245 RHVVLNGQTTLPCIAQGHPVPTYRWFKEENE--QLLPLQLSERITIVSAGLLKITKARLEDSGKY 307
Fly 308 LCWVNNTAGEETIQVSLTVTAPLT---AHLQPQVQTVDVDKDAQFQ-CIVSGHPVHDVNWLHDGK 368
Fly 369 PILRDNRVEILTDPPRLIIKKVQKEDPGMYQCFVSNE------------------------WEQI 409
Fly 410 QSTAELQLGDASPELLYWFSEQTLQPGPT-VSLKCVATGNPLP--QFTWSLDGFPIPDSSRFLVG 471
Fly 472 QYVTIHDDVISHVNISNVKEEDGGEYTC--TAQNAIGKVSHS-AKVNIYGLPYIREMPKITGIS- 532
Fly 533 -GSDLIVKCPVAGYPIDKIHWERDGQTLPINRRQRAYNNGTLIIEQLQRL--EDAGTYTCMAQNK 594
Fly 595 QKQ-TSRRNVEIQVLVPPKIMPIQAMTNMLREGMRAAISCQILEGDLPVSFRWERNGKPLIGTGN 658
Fly 659 ---EVFRRLDEYSASLVIEHISSDHSGNYTCIASNVAGTERFTVPLTV------NVPPKWILEPK 714
Fly 715 DSSAQAGADVLLHCQSSGYPTPTI--TWKKAIGPTPGEYKDFLYEPTVQLFPNGTIFFKKISKES 777
Fly 778 QGHFLCEAKNNIGSGVSKVIFLKVNVPAHFQTKTKQISVAKGKQVHVQCNVQGDNPIDFKWKIQA 842
Fly 843 TQQYLDESLDSRYTIRDQVLDDGMVSELGISHTYRQDTGIYICQASNAFGQDEMSIQLIVQEVPE 907
Fly 908 QPKNLRI--NSQQSRSLQLTWSQPFAGNSPIEEYHIYYKQISDIWQ--------NAEHLTIAGAQ 962
Fly 963 TVINIQQLRPAKAYHIRMSAENKLGASEFS-EVVQVTTLEEVPSGPPLAVRAEPKSSTEIFVTWD 1026
Fly 1027 APERDHWNGILLGYYVGYQMSLTPEDKEVNPTQGFSFKTV---EVRSHFGGETVLANLNKFTQYH 1088
Fly 1089 VIVQAYTSQGSGPPSKEIAVQTMEDVPSSPPESPQCDVLGSTSIYITWSPPDIDGQNGKIKGYKV 1153
Fly 1154 FYISVDELYETDPEVV---------KSTNQYVTIENLRKYTNYTVWVLAYTKVGDGMKTKPFYCR 1209
Fly 1210 THEDVPSAPQAIKAIPASSSKIIISWLPPDLPNGDITGYTFYMSMLEGGREEGTHKRLLGPFVEM 1274
Fly 1275 HETVRTQESATYQFWLTASTKMGEGEKTQVVT---VPPN-NKVPARIV--SFSQRIVT------- 1326
Fly 1327 -------------------------PWK-----------EHLELP--------------CRKVG- 1340
Fly 1341 -------------------APAPVTI-----------W----------------------RQDGH 1353
Fly 1354 ---NMET-----SARKTI--AKNGTLYMKECQASDA---GNYTCSV-------------EN---- 1388
Fly 1389 ---------TWG--------------------KDE-------------------------IVYNI 1399
Fly 1400 VVKV-------PPEAP---------------NLTVINAYTDSLLLEWMDNSHGGSPILGYVINYK 1442
Fly 1443 RDNGD---WEELQVDSKTTSHLLTNLWCGTRYQLYITAYNKIGTGLPCD--IVNSYTKGNPPVQP 1502
Fly 1503 KHSQMITNNSTSVTC---WLDSWGDGGCGILYFMIESRVYGRSSWAVVSNHIPPTERIYTVSDLV 1564
Fly 1565 PGTKYQLKVTAHNNAGSTTAIYNFTTLSTQGVIYNNDHSTPVSHLSDLPFYANFKLLLPICFSLL 1629
Fly 1630 MLL------------ALIGAALFLRKRKLASQARLASSSMSESPSLANLQNKQNRDQQYLAVRCN 1682
Fly 1683 PGTSAPRGSNSNDSGSFGKAEGNEYIEDICPYATFQLNKQTYSESSYSGNVYSGPYHSVRGSFVY 1747
Fly 1748 HDVKPESYHSKEPEYTKVRRKVGRLRD-----PHSESQESDNPG--------STDSEVRKILTLH 1799
Fly 1800 IPIT--EYDTLGSESDNDVSARALNSAKYRAQRDTQDETSSSSETTPTSMTRKSKPPFAARKGGK 1862
Fly 1863 PGTSGKRHVRSSSGYSSHN 1881 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | 1/2 (50%) |
Ig strand A | 32..35 | CDD:409353 | |||
Ig strand A' | 41..45 | CDD:409353 | |||
Ig strand B | 48..57 | CDD:409353 | |||
Ig strand D | 75..78 | CDD:409353 | |||
Ig strand E | 83..88 | CDD:409353 | |||
Ig strand F | 101..109 | CDD:409353 | |||
Ig strand G | 112..124 | CDD:409353 | 1/2 (50%) | ||
Ig | 235..326 | CDD:416386 | 21/92 (23%) | ||
Ig strand A | 235..238 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 244..248 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 251..258 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 266..271 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 276..279 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 285..289 | CDD:409353 | 2/3 (67%) | ||
Ig strand E | 292..298 | CDD:409353 | 0/5 (0%) | ||
Ig strand F | 305..313 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 316..326 | CDD:409353 | 3/9 (33%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 26/115 (23%) | ||
Ig strand B | 347..351 | CDD:409549 | 1/4 (25%) | ||
Ig strand C | 360..364 | CDD:409549 | 1/3 (33%) | ||
Ig strand E | 383..387 | CDD:409549 | 1/3 (33%) | ||
Ig strand F | 397..402 | CDD:409549 | 1/4 (25%) | ||
Ig strand G | 410..413 | CDD:409549 | 0/2 (0%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 25/99 (25%) | ||
Ig strand B | 439..443 | CDD:409548 | 1/3 (33%) | ||
Ig strand C | 452..456 | CDD:409548 | 1/3 (33%) | ||
Ig strand E | 482..486 | CDD:409548 | 0/3 (0%) | ||
Ig strand F | 496..501 | CDD:409548 | 2/6 (33%) | ||
Ig strand G | 509..512 | CDD:409548 | 0/3 (0%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 22/91 (24%) | ||
Ig strand B | 536..540 | CDD:409550 | 0/3 (0%) | ||
Ig strand C | 549..553 | CDD:409550 | 1/3 (33%) | ||
Ig strand E | 571..575 | CDD:409550 | 0/3 (0%) | ||
Ig strand F | 586..591 | CDD:409550 | 1/4 (25%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 29/95 (31%) | ||
Ig strand A | 611..613 | CDD:409353 | 0/1 (0%) | ||
Ig strand A' | 620..624 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 627..636 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 641..648 | CDD:409353 | 2/6 (33%) | ||
Ig strand C' | 650..652 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 659..664 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 668..675 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 682..690 | CDD:409353 | 6/7 (86%) | ||
Ig strand G | 693..702 | CDD:409353 | 3/8 (38%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 12/96 (13%) | ||
Ig strand B | 724..728 | CDD:409546 | 1/3 (33%) | ||
Ig strand C | 737..741 | CDD:409546 | 1/5 (20%) | ||
Ig strand E | 766..770 | CDD:409546 | 0/3 (0%) | ||
Ig strand F | 780..785 | CDD:409546 | 0/4 (0%) | ||
Ig strand G | 794..797 | CDD:409546 | 0/2 (0%) | ||
Ig | 818..904 | CDD:416386 | 16/85 (19%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 1/6 (17%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 0/5 (0%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 0/2 (0%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 0/3 (0%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 2/5 (40%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 3/7 (43%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 4/9 (44%) | ||
FN3 | 906..999 | CDD:238020 | 30/103 (29%) | ||
FN3 | 1006..1110 | CDD:238020 | 29/106 (27%) | ||
fn3 | 1117..1203 | CDD:394996 | 30/94 (32%) | ||
FN3 | 1215..1307 | CDD:238020 | 23/94 (24%) | ||
Ig | <1334..1401 | CDD:416386 | 30/217 (14%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 1/36 (3%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 2/20 (10%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 3/31 (10%) | ||
FN3 | 1405..1494 | CDD:238020 | 27/108 (25%) | ||
FN3 | 1499..1580 | CDD:238020 | 19/83 (23%) | ||
sdk1b | XP_017211454.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |