Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021323628.1 | Gene: | ptprq / 555426 | ZFINID: | ZDB-GENE-050419-183 | Length: | 2896 | Species: | Danio rerio |
Alignment Length: | 2016 | Identity: | 415/2016 - (20%) |
---|---|---|---|
Similarity: | 678/2016 - (33%) | Gaps: | 645/2016 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 163 WVQDTG------MHLYPN-------TDIGGKYTVLSNGELYINNAGPNDAYKSYTCRTVNRLTGE 214
Fly 215 VQISTYPGRIIVT----------EPKGMVQPRINVEKHSMRHVVLNGQTTLPCIAQGH------- 262
Fly 263 -----PVPTYRWFKEENEQL-LPLQLSERITIVSAGLLKITKARLEDSGKYLCWVNNTAGEETIQ 321
Fly 322 VSL---TVTAP------LTAHLQPQVQTVDV----------------------------DKDAQF 349
Fly 350 QCIVSGHPVH-----DVNWLHDGKPILRDNRVEILTD-----------PPRLI--------IKKV 390
Fly 391 QKEDPGMYQ--CFVSNEWEQIQSTAELQLGDASPELLYWFSEQTLQPGPTVSLKCVATGNPLPQF 453
Fly 454 TWSLDGFPIPDSSRFLVGQYVTIHDDVISHVNISNVKEEDGGEYTCTAQNAIGKVSHSAKVN--- 515
Fly 516 IY-GLP-----YIREMPKITGISGSDLI--------VKCPVAGY-----------PIDKIHWER- 554
Fly 555 DGQTLPINRRQRAYNNG------TLIIEQLQRLEDAGTYTCMAQNKQKQTSRRNVEIQVLVPPKI 613
Fly 614 MPIQAMTNMLREGMRAAISCQILEGDLPVSFRWERNGKPLIGTGNEVFRRLDEYSASLVIEHISS 678
Fly 679 DHSGNYTCIASNVAGTERFTVPLTVNVPPKWIL---EPKDSSAQAGADVLLHCQSSGYP--TPTI 738
Fly 739 TWKKAIGPTPGE--------YKDFLYEPT-----------VQLFP-----------NGTIFFKKI 773
Fly 774 SKESQGHFLCEAKNNIGSGVSKVIFLKVN--VPAHFQTKTKQISVAKGKQVHVQCNVQGDNPIDF 836
Fly 837 KWKIQATQQYLDESLDSRYTIRDQVLDDGMVSELGI----SHTYRQDTGIYICQASNAFGQDEMS 897
Fly 898 IQ-----LIVQEVPEQ-PKNLRINSQQSRSLQLTWSQPFAGNSPIEEYHIYYKQISDIWQNAEHL 956
Fly 957 TIAGAQTVINIQQLRPAKAYHIRMSAENKLGASE-FSEVVQVTTLEEVPSGPPLAVRAEPKSSTE 1020
Fly 1021 IFVTWDAPERDHWNGILLGYYVGYQMSLTPEDKEVNPTQGFSFKTVEVRSHFGGETVLANLNKFT 1085
Fly 1086 QYHVIVQAYTSQGSGPPSKEIA-VQTMED----------VPSSPPESPQCDVLGSTSIYITWSPP 1139
Fly 1140 DIDGQNGKIKGYKVFYISVDELYETDPEVVKSTNQYVTIENLRKYTNYTVWVLAYTKVGDGMKTK 1204
Fly 1205 PFYCRTHEDVPS-APQAIKAIPASSSKIIISWLPPDLPNGDITGYTFYMSMLEGGREEGT----- 1263
Fly 1264 --HKRLLGPFVEMHETVRTQESATYQFWLTASTKMGEG----------------------EKTQV 1304
Fly 1305 VTVPPNN--------KVP--------ARIVSFSQRIVTPWKEHLE--------LPCRKVGAPAPV 1345
Fly 1346 TIWRQDGHNMETSARKTIAK--NGTLYM---------------KECQASDAGNYTCSVENTWGKD 1393
Fly 1394 EIVYNIVVKVPPEAPNLTVI--NAYTDSLLLEWMDNSHGGSPILGYVINYKRDNGDWEELQVDSK 1456
Fly 1457 TT------SHL-LTNLWCGTRYQLYITAYNKIGTGLPCDIVNSYTKGNPPVQPKHSQMITNNSTS 1514
Fly 1515 VTCWLDSWGDG----------GCGILYFMIESRVYGRSSWAVVSNHIPPTERIYTVSDLVPGTKY 1569
Fly 1570 QLKVTAHNNAGSTTAIYNFTTLSTQGVIYNNDHSTPVSHLS-------------DLPFYANFKLL 1621
Fly 1622 LPICFSLLMLLALIGAALFLRKRKLASQARLASSSMSESPSLANLQNKQNRDQQYLAVRCNPGTS 1686
Fly 1687 APRGSNSNDSG-----SFGKAEGNEYIEDICPYATFQLNKQTYSESSYSGNVYSGPYHSVRGSFV 1746
Fly 1747 YHDVKPE----SYHSKEPEYTKVRRKVGRLRDPHSESQE--------SDNPGSTDSEVRKILT-- 1797
Fly 1798 ---------LHIPITEYDTLGSESDNDVSARALNSAKYRAQRDTQDETSS------SSETTPTSM 1847
Fly 1848 T 1848 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | |
Ig strand A | 32..35 | CDD:409353 | |||
Ig strand A' | 41..45 | CDD:409353 | |||
Ig strand B | 48..57 | CDD:409353 | |||
Ig strand D | 75..78 | CDD:409353 | |||
Ig strand E | 83..88 | CDD:409353 | |||
Ig strand F | 101..109 | CDD:409353 | |||
Ig strand G | 112..124 | CDD:409353 | |||
Ig | 235..326 | CDD:416386 | 18/106 (17%) | ||
Ig strand A | 235..238 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 244..248 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 251..258 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 266..271 | CDD:409353 | 0/4 (0%) | ||
Ig strand C' | 276..279 | CDD:409353 | 1/3 (33%) | ||
Ig strand D | 285..289 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 292..298 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 305..313 | CDD:409353 | 0/7 (0%) | ||
Ig strand G | 316..326 | CDD:409353 | 3/12 (25%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 25/147 (17%) | ||
Ig strand B | 347..351 | CDD:409549 | 0/3 (0%) | ||
Ig strand C | 360..364 | CDD:409549 | 1/3 (33%) | ||
Ig strand E | 383..387 | CDD:409549 | 2/11 (18%) | ||
Ig strand F | 397..402 | CDD:409549 | 0/6 (0%) | ||
Ig strand G | 410..413 | CDD:409549 | 1/2 (50%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 11/96 (11%) | ||
Ig strand B | 439..443 | CDD:409548 | 2/3 (67%) | ||
Ig strand C | 452..456 | CDD:409548 | 1/3 (33%) | ||
Ig strand E | 482..486 | CDD:409548 | 0/3 (0%) | ||
Ig strand F | 496..501 | CDD:409548 | 1/4 (25%) | ||
Ig strand G | 509..512 | CDD:409548 | 1/2 (50%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 20/117 (17%) | ||
Ig strand B | 536..540 | CDD:409550 | 1/11 (9%) | ||
Ig strand C | 549..553 | CDD:409550 | 0/3 (0%) | ||
Ig strand E | 571..575 | CDD:409550 | 2/9 (22%) | ||
Ig strand F | 586..591 | CDD:409550 | 1/4 (25%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 15/92 (16%) | ||
Ig strand A | 611..613 | CDD:409353 | 1/1 (100%) | ||
Ig strand A' | 620..624 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 627..636 | CDD:409353 | 0/8 (0%) | ||
Ig strand C | 641..648 | CDD:409353 | 0/6 (0%) | ||
Ig strand C' | 650..652 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 659..664 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 668..675 | CDD:409353 | 1/6 (17%) | ||
Ig strand F | 682..690 | CDD:409353 | 1/7 (14%) | ||
Ig strand G | 693..702 | CDD:409353 | 2/8 (25%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 25/129 (19%) | ||
Ig strand B | 724..728 | CDD:409546 | 0/3 (0%) | ||
Ig strand C | 737..741 | CDD:409546 | 1/3 (33%) | ||
Ig strand E | 766..770 | CDD:409546 | 1/3 (33%) | ||
Ig strand F | 780..785 | CDD:409546 | 1/4 (25%) | ||
Ig strand G | 794..797 | CDD:409546 | 1/2 (50%) | ||
Ig | 818..904 | CDD:416386 | 16/94 (17%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 0/6 (0%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 0/2 (0%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 1/3 (33%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 1/9 (11%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 1/7 (14%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 1/14 (7%) | ||
FN3 | 906..999 | CDD:238020 | 28/94 (30%) | ||
FN3 | 1006..1110 | CDD:238020 | 32/104 (31%) | ||
fn3 | 1117..1203 | CDD:394996 | 19/85 (22%) | ||
FN3 | 1215..1307 | CDD:238020 | 29/121 (24%) | ||
Ig | <1334..1401 | CDD:416386 | 13/83 (16%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 2/19 (11%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 0/6 (0%) | ||
FN3 | 1405..1494 | CDD:238020 | 25/97 (26%) | ||
FN3 | 1499..1580 | CDD:238020 | 19/90 (21%) | ||
ptprq | XP_021323628.1 | fn3 | 209..278 | CDD:306538 | |
FN3 | 301..363 | CDD:328772 | |||
FN3 | 382..470 | CDD:238020 | 20/77 (26%) | ||
FN3 | 475..569 | CDD:238020 | 20/117 (17%) | ||
FN3 | 723..808 | CDD:238020 | 19/116 (16%) | ||
FN3 | 829..>864 | CDD:238020 | 5/34 (15%) | ||
FN3 | <1033..1067 | CDD:238020 | 10/33 (30%) | ||
FN3 | 1072..1161 | CDD:238020 | 19/103 (18%) | ||
fn3 | 1170..1241 | CDD:306538 | 21/76 (28%) | ||
fn3 | 1264..1340 | CDD:306538 | 29/93 (31%) | ||
fn3 | 1368..>1410 | CDD:306538 | 11/49 (22%) | ||
FN3 | 1460..1549 | CDD:238020 | 26/100 (26%) | ||
FN3 | 1585..1670 | CDD:214495 | 17/94 (18%) | ||
FN3 | 1697..1768 | CDD:238020 | 21/80 (26%) | ||
FN3 | 1781..1872 | CDD:238020 | 22/102 (22%) | ||
fn3 | 1878..1958 | CDD:306538 | 15/100 (15%) | ||
FN3 | 2029..2133 | CDD:238020 | 15/81 (19%) | ||
FN3 | 2141..2235 | CDD:238020 | |||
FN3 | 2242..2338 | CDD:238020 | |||
UP_III_II | 2354..>2491 | CDD:297589 | |||
PTPc | 2599..2855 | CDD:214550 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |