Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017449758.1 | Gene: | Nrcam / 497815 | RGDID: | 3209 | Length: | 1315 | Species: | Rattus norvegicus |
Alignment Length: | 1897 | Identity: | 354/1897 - (18%) |
---|---|---|---|
Similarity: | 582/1897 - (30%) | Gaps: | 724/1897 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 KAILILYVIRAETSQFVNGLD---------------LQGPIFLHEPPHRVEFSNNSGGLIECSGH 57
Fly 58 GSPPPEVEW----TPIPPQQDMVFQLSNGSMMFYPFTAEKYRHEVHATVYRCKLRNLVGTVLSRE 118
Fly 119 VHVRGVVNQKYAVQVHDEYVM-TGNTAVLKCQVPSYMSEFVLVTAWVQDTGMHLYPNTDIGGKYT 182
Fly 183 VLSNGELYINNAGPNDAYKSYTCRTVNRLTGEVQ---------IS------TYPGRIIVTE---- 228
Fly 229 ------PKGMVQPRIN-VEKHSMRHVVLNGQTTLPCIAQGHPVPTYRWFKEENEQLLPLQLSERI 286
Fly 287 TIVSAGLLKITKARLEDSGKYLCWVNNTAGEETIQVSLTVTAPLTAHLQPQVQTVDVDKDAQFQC 351
Fly 352 IVSGHPVHDVNWLHDGKPILRDNRVEILTDPPRLIIKKVQKEDPGMYQCFVSNEWEQIQSTAELQ 416
Fly 417 LGDASPELLYWF---SEQTLQPGPTVSLKCVATGNPLPQFTWSLDGFPI----PDSSRFLVGQYV 474
Fly 475 TIHDDVISHVNISNVKEEDGGEYTCTAQNAIGKVSHSAKVNIYGLPYIREMPKITG--------I 531
Fly 532 SGSDLIVKCPVAGYPIDKIHWERDGQTLPINRRQRAYNNGTLIIEQLQRLEDAGTYTCMAQNKQK 596
Fly 597 QTSRRNVEIQVLVPPKIMPIQAMTNMLREGMRAAISCQILEGDLPVSFRWERNGKPLIGTGNEVF 661
Fly 662 RRLDEYSASLVIEHISSDHSGNYTCIASNVAGTERFTVPLTVNVPPKWILEPKDSSAQAGADVLL 726
Fly 727 HCQSSGYPT--PTITWKKAIGPTPGEYKDFLYEPTVQLFPNGTIFFKKISKESQGHFLCEAKNNI 789
Fly 790 GSGVSKVIFLKVNVPAHFQTKTKQISVAKGKQVHVQCNVQGDNPIDFKWKIQATQQYLDESLDSR 854
Fly 855 YTI-RDQVLDDGMVSELGISHTYRQDTGIYICQASNAFGQDEMSIQLI------------VQEVP 906
Fly 907 EQPKNLRINSQQSRSLQLTWSQPFAGNSPIEEYHIYYKQI---SDIWQN-AEHLTIAGAQTVINI 967
Fly 968 QQLRPAKAYHIRMSAENKLGASEFSEV-VQVTTLEEVPSGPPLAVRAEPKSSTEIFVTWDAPERD 1031
Fly 1032 HWNGILLGYYVGYQMSLTPEDKEVNPTQGFSFKTVEVRSHFGGETVLANLNK--------FTQYH 1088
Fly 1089 VIVQAYTSQGSGPPSKEIAVQTMEDVPSSPPESPQCDVLGSTSIYITWSPPDIDGQNGKIKGYKV 1153
Fly 1154 FYISVDELYETDPEVV-------KSTNQYVTIENLRKYTNYTVWVLAYTKVGDGMKTKPFYCRTH 1211
Fly 1212 EDVPSAPQAIKAIPASSSKIIISWLPPDLPNGDITGYTFYMSMLEGGREEGTHKRLLGPFVEM-- 1274
Fly 1275 --HETVRTQE----SATYQFWLTASTKMGEGEKTQVVTVPPNNKVPARIVSFSQRIVTPWKEHLE 1333
Fly 1334 LPCRKVGAPAPVTIWRQDGHNMETSARKTIAKNGTLYMKECQASDAGNYTCSVENTWGKDEIVYN 1398
Fly 1399 IVVKVPPEAPNLTVINAYTDSLLLEWMDNSHGGSPILGYVINYKRDNGDWEELQVDSKTTSHLLT 1463
Fly 1464 NLWCGTRYQLYITAYNKIGTGLPCDIVNSYTKGNPPVQPKHSQMITNNSTSVTCWLDSWGDGGCG 1528
Fly 1529 ILYFMIESRVYG-RSSW--AVVSNHIPPTERIYTVSDLVPGTKYQLKVTAHNNAGSTTAIYNFTT 1590
Fly 1591 ----------LSTQGVIYNNDHSTPVSHLSDLPFYANFKLLLPICFSLLMLLALIGAALFLRKRK 1645
Fly 1646 LASQARLASSSMSESPSLANLQNKQNRDQQYLAVRCNPGTSAP--RGSNSNDSGSFGKAEGNEYI 1708
Fly 1709 EDICPYATFQLNKQTYSESSYSGNVYSGPYHSVRGSFVYHDVKPESYHSKEPEYTKVRRKVGRLR 1773
Fly 1774 DPHSESQESDNP 1785 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | 23/96 (24%) |
Ig strand A | 32..35 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 41..45 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 48..57 | CDD:409353 | 2/8 (25%) | ||
Ig strand D | 75..78 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 83..88 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 101..109 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 112..124 | CDD:409353 | 4/11 (36%) | ||
Ig | 235..326 | CDD:416386 | 21/91 (23%) | ||
Ig strand A | 235..238 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 244..248 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 251..258 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 266..271 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 276..279 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 285..289 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 292..298 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 305..313 | CDD:409353 | 1/7 (14%) | ||
Ig strand G | 316..326 | CDD:409353 | 2/9 (22%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 9/87 (10%) | ||
Ig strand B | 347..351 | CDD:409549 | 0/3 (0%) | ||
Ig strand C | 360..364 | CDD:409549 | 0/3 (0%) | ||
Ig strand E | 383..387 | CDD:409549 | 0/3 (0%) | ||
Ig strand F | 397..402 | CDD:409549 | 3/4 (75%) | ||
Ig strand G | 410..413 | CDD:409549 | 0/2 (0%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 31/100 (31%) | ||
Ig strand B | 439..443 | CDD:409548 | 1/3 (33%) | ||
Ig strand C | 452..456 | CDD:409548 | 0/3 (0%) | ||
Ig strand E | 482..486 | CDD:409548 | 0/3 (0%) | ||
Ig strand F | 496..501 | CDD:409548 | 2/4 (50%) | ||
Ig strand G | 509..512 | CDD:409548 | 0/2 (0%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 15/94 (16%) | ||
Ig strand B | 536..540 | CDD:409550 | 0/3 (0%) | ||
Ig strand C | 549..553 | CDD:409550 | 1/3 (33%) | ||
Ig strand E | 571..575 | CDD:409550 | 1/3 (33%) | ||
Ig strand F | 586..591 | CDD:409550 | 1/4 (25%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 12/92 (13%) | ||
Ig strand A | 611..613 | CDD:409353 | 0/1 (0%) | ||
Ig strand A' | 620..624 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 627..636 | CDD:409353 | 0/8 (0%) | ||
Ig strand C | 641..648 | CDD:409353 | 2/6 (33%) | ||
Ig strand C' | 650..652 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 659..664 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 668..675 | CDD:409353 | 0/6 (0%) | ||
Ig strand F | 682..690 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 693..702 | CDD:409353 | 2/8 (25%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 15/96 (16%) | ||
Ig strand B | 724..728 | CDD:409546 | 1/3 (33%) | ||
Ig strand C | 737..741 | CDD:409546 | 2/3 (67%) | ||
Ig strand E | 766..770 | CDD:409546 | 0/3 (0%) | ||
Ig strand F | 780..785 | CDD:409546 | 0/4 (0%) | ||
Ig strand G | 794..797 | CDD:409546 | 0/2 (0%) | ||
Ig | 818..904 | CDD:416386 | 11/98 (11%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 0/6 (0%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 0/5 (0%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 1/2 (50%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 0/3 (0%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 0/5 (0%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 4/7 (57%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 2/21 (10%) | ||
FN3 | 906..999 | CDD:238020 | 33/97 (34%) | ||
FN3 | 1006..1110 | CDD:238020 | 23/111 (21%) | ||
fn3 | 1117..1203 | CDD:394996 | 16/92 (17%) | ||
FN3 | 1215..1307 | CDD:238020 | 29/99 (29%) | ||
Ig | <1334..1401 | CDD:416386 | 7/66 (11%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 0/4 (0%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 1/7 (14%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 0/6 (0%) | ||
FN3 | 1405..1494 | CDD:238020 | 9/88 (10%) | ||
FN3 | 1499..1580 | CDD:238020 | 15/83 (18%) | ||
Nrcam | XP_017449758.1 | IgI_NrCAM | 50..144 | CDD:409458 | 21/93 (23%) |
Ig strand B | 68..72 | CDD:409458 | 1/3 (33%) | ||
Ig strand C | 81..85 | CDD:409458 | 0/3 (0%) | ||
Ig strand E | 106..110 | CDD:409458 | 0/3 (0%) | ||
Ig strand F | 124..129 | CDD:409458 | 3/4 (75%) | ||
Ig strand G | 138..141 | CDD:409458 | 1/2 (50%) | ||
Ig | 153..242 | CDD:416386 | 19/94 (20%) | ||
Ig strand A | 153..156 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 158..162 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 165..173 | CDD:409353 | 3/7 (43%) | ||
Ig strand C | 180..186 | CDD:409353 | 1/8 (13%) | ||
Ig strand C' | 189..192 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 198..202 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 204..208 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 219..227 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 230..242 | CDD:409353 | 1/11 (9%) | ||
Ig | 281..362 | CDD:416386 | 28/180 (16%) | ||
Ig strand B | 292..296 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 305..309 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 327..331 | CDD:409353 | 2/15 (13%) | ||
Ig strand F | 341..346 | CDD:409353 | 3/4 (75%) | ||
Ig strand G | 354..357 | CDD:409353 | 0/2 (0%) | ||
Ig | 366..454 | CDD:416386 | 31/102 (30%) | ||
Ig strand B | 382..386 | CDD:409353 | 1/3 (33%) | ||
Ig strand C | 395..399 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 419..423 | CDD:409353 | 0/13 (0%) | ||
Ig strand F | 433..438 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 446..449 | CDD:409353 | 0/2 (0%) | ||
Ig | 460..546 | CDD:416386 | 25/182 (14%) | ||
Ig strand A | 460..463 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 467..470 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 476..483 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 489..494 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 496..498 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 505..509 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 512..517 | CDD:409353 | 2/55 (4%) | ||
Ig strand F | 525..533 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 536..546 | CDD:409353 | 3/9 (33%) | ||
Ig | 553..637 | CDD:416386 | 25/196 (13%) | ||
Ig strand A | 553..556 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 558..562 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 565..574 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 582..587 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 590..593 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 597..602 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 603..609 | CDD:409353 | 1/14 (7%) | ||
Ig strand F | 616..624 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 627..637 | CDD:409353 | 2/9 (22%) | ||
FN3 | 651..741 | CDD:238020 | 32/93 (34%) | ||
fn3 | 754..836 | CDD:394996 | 22/101 (22%) | ||
fn3 | 852..944 | CDD:394996 | 16/91 (18%) | ||
fn3 | 957..1041 | CDD:394996 | 27/90 (30%) | ||
fn3 | 1075..1143 | CDD:394996 | 22/170 (13%) | ||
Bravo_FIGEY | 1198..1287 | CDD:404722 | 13/93 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |