Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011539620.1 | Gene: | HSPG2 / 3339 | HGNCID: | 5273 | Length: | 4574 | Species: | Homo sapiens |
Alignment Length: | 1973 | Identity: | 413/1973 - (20%) |
---|---|---|---|
Similarity: | 654/1973 - (33%) | Gaps: | 559/1973 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 QGPIFLHEPPHRVEFSNNSGGLIECSGHGSPPPEVEWT-----PIPPQQDMVFQLSNGSMMFYPF 89
Fly 90 TAEKYRHEVHATVYRCKLRNLVGTVLSR-EVHVRGVVNQKYAVQVHD---EYVMTGNTAVLKCQV 150
Fly 151 PSYMSEFVLVTAWVQDTGMHLYPNTDIGGKYTVLS---NGELYINNAGPNDAYKSYTCRTVNRL- 211
Fly 212 ------TGEVQIS-TYPGRIIVTEPKGMVQPRINVEKHSMRHVVLNGQ-TTLPCIAQGHPVPTYR 268
Fly 269 WFKEENEQLLPLQLSERITIVSAGLLKITKARLEDSGKYLCWVNNTAGEETIQVSLTVTAPLTAH 333
Fly 334 LQ--PQVQTVDVDKDAQFQCIVSGHPVHDVNWLHDG---KPILRDNRVEILTDPPRLIIKKVQKE 393
Fly 394 DPGMYQCFVSNEWEQIQSTAE---LQLGDAS-PELLYWFSEQTLQPGPTVSLKCVATGNPLPQFT 454
Fly 455 WSLDGFPIPDSSRFLVGQYVTIHDDVISHVNISNVKEEDGGEYTCTAQNAIGKVSHSAKVNIY-- 517
Fly 518 ---GLPY---------IREMPKITGIS-GSDLIVKCPVAGYPIDKIHWERDGQTLPINRRQRAYN 569
Fly 570 NGTLIIEQLQRLEDAGTYTCMAQNKQKQTSRRNVEIQVLV-------PPKIMP--IQAMTNMLRE 625
Fly 626 GMRAAISCQILEGDLPVSFRWERNGKPLIGTGNEVFRRLDEYSASLVIEHISSDHSGNYTCIASN 690
Fly 691 ---------VAGTE--RFTVPLTVNVPPKWILEPKDSSAQAGADVLLHCQSSGYPTPTITWKKAI 744
Fly 745 GPTPGEYKDFLYEPTVQLFPNGTIF-FKKISKESQGHFLCEAKNNIGSGV----SKVIFLKV--N 802
Fly 803 VPAHFQTKTKQI-----SVAKGKQVHVQCNVQGDNPIDFKWKIQATQQYLDESLDSRYTIRDQVL 862
Fly 863 DDGMVSELGISHTYRQDTGIYICQASNAFGQDEMSIQLIVQEVPEQPKNLRINSQQSRS----LQ 923
Fly 924 LTWSQPFAGN-----------SPIEEYHIYYKQISDIWQNAEHLTIAGAQTVINIQQLRPAKAYH 977
Fly 978 IRMSAENKLGASEFSEVV--QVTTLEEVPS-GPPLAVRAEPKSST-----------------EIF 1022
Fly 1023 VTW-----DAPERDHWNGILLGYYVGYQMSLTPEDK------------------EVNPTQG---- 1060
Fly 1061 ----FSFKTVEVRSHFG-GETVLANLNKFTQYHVIVQAYTSQGSGP------------------- 1101
Fly 1102 -------------PSKEIAVQTMEDVPSSPPESP-------------------------QCDVLG 1128
Fly 1129 STSIYITW-----------------------SPPD-------IDGQNGKIKGYKVFYISVDELYE 1163
Fly 1164 TDPEVVKSTNQYVTIENLRKYTNYTVWVLAYTKVGDGMKTKPFYCRTHEDVPSAPQAIKA----- 1223
Fly 1224 ---IPASSSKII------ISWLPPDLPNGDITGYTFYMSMLEGGREEGTHKRLLGPFVEMHETVR 1279
Fly 1280 TQESATYQFWLTASTKMGEGEKTQVVTVPPNN----KVPARIVSFSQRIVTPWK-EHLELPCRKV 1339
Fly 1340 GAPAPVTI-WRQDGHNMETSARKTIAKNGTLY-MKECQASDAGNYTCSVENTWGKDEIVYNIVVK 1402
Fly 1403 VPPEAPNLTVINAYTDSLLLE---W--------MDNSHGGSPILGYVINYKRDNGDWEEL----- 1451
Fly 1452 QVDSKT----TSHLLTNLW------CGTRYQLYI-TAYNKIGTG-LPCDIV---NSYTKGNPPVQ 1501
Fly 1502 PKHSQMITNNSTSVTCWLDSWGDGGCGILYFMIES----------------RVYGRSSWAVVSNH 1550
Fly 1551 IPPTERI-YTVSDLVPGTKYQLKVTAHNN--AGSTTAIYNFTTLSTQGVIYNNDHSTPVSHLSDL 1612
Fly 1613 PFYANFKLLLPICFSLLMLLALIGAALFLR---KRKLASQARLASSSMSESPSLANLQNKQNRDQ 1674
Fly 1675 QY--LAVRCNPG----TSAPRGS 1691 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | 26/98 (27%) |
Ig strand A | 32..35 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 41..45 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 48..57 | CDD:409353 | 1/8 (13%) | ||
Ig strand D | 75..78 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 83..88 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 101..109 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 112..124 | CDD:409353 | 4/12 (33%) | ||
Ig | 235..326 | CDD:416386 | 23/91 (25%) | ||
Ig strand A | 235..238 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 244..248 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 251..258 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 266..271 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 276..279 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 285..289 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 292..298 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 305..313 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 316..326 | CDD:409353 | 2/9 (22%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 21/95 (22%) | ||
Ig strand B | 347..351 | CDD:409549 | 0/3 (0%) | ||
Ig strand C | 360..364 | CDD:409549 | 0/3 (0%) | ||
Ig strand E | 383..387 | CDD:409549 | 1/3 (33%) | ||
Ig strand F | 397..402 | CDD:409549 | 2/4 (50%) | ||
Ig strand G | 410..413 | CDD:409549 | 1/2 (50%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 25/93 (27%) | ||
Ig strand B | 439..443 | CDD:409548 | 1/3 (33%) | ||
Ig strand C | 452..456 | CDD:409548 | 2/3 (67%) | ||
Ig strand E | 482..486 | CDD:409548 | 1/3 (33%) | ||
Ig strand F | 496..501 | CDD:409548 | 3/4 (75%) | ||
Ig strand G | 509..512 | CDD:409548 | 0/2 (0%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 21/96 (22%) | ||
Ig strand B | 536..540 | CDD:409550 | 1/3 (33%) | ||
Ig strand C | 549..553 | CDD:409550 | 0/3 (0%) | ||
Ig strand E | 571..575 | CDD:409550 | 2/3 (67%) | ||
Ig strand F | 586..591 | CDD:409550 | 2/4 (50%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 26/105 (25%) | ||
Ig strand A | 611..613 | CDD:409353 | 0/1 (0%) | ||
Ig strand A' | 620..624 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 627..636 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 641..648 | CDD:409353 | 1/6 (17%) | ||
Ig strand C' | 650..652 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 659..664 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 668..675 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 682..690 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 693..702 | CDD:409353 | 3/10 (30%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 21/99 (21%) | ||
Ig strand B | 724..728 | CDD:409546 | 1/3 (33%) | ||
Ig strand C | 737..741 | CDD:409546 | 1/3 (33%) | ||
Ig strand E | 766..770 | CDD:409546 | 1/4 (25%) | ||
Ig strand F | 780..785 | CDD:409546 | 1/4 (25%) | ||
Ig strand G | 794..797 | CDD:409546 | 1/2 (50%) | ||
Ig | 818..904 | CDD:416386 | 17/85 (20%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 0/6 (0%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 1/2 (50%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 0/3 (0%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 2/5 (40%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 3/7 (43%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 3/9 (33%) | ||
FN3 | 906..999 | CDD:238020 | 20/109 (18%) | ||
FN3 | 1006..1110 | CDD:238020 | 31/184 (17%) | ||
fn3 | 1117..1203 | CDD:394996 | 16/140 (11%) | ||
FN3 | 1215..1307 | CDD:238020 | 26/105 (25%) | ||
Ig | <1334..1401 | CDD:416386 | 16/68 (24%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 0/4 (0%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 2/6 (33%) | ||
FN3 | 1405..1494 | CDD:238020 | 20/119 (17%) | ||
FN3 | 1499..1580 | CDD:238020 | 16/99 (16%) | ||
HSPG2 | XP_011539620.1 | SEA | 80..193 | CDD:214554 | |
LDLa | 216..251 | CDD:238060 | |||
LDLa | 302..336 | CDD:238060 | |||
LDLa | 342..376 | CDD:238060 | |||
LDLa | 385..420 | CDD:238060 | |||
IG | 431..507 | CDD:214652 | |||
Ig_Perlecan_D2_like | 438..515 | CDD:143220 | |||
LamB | 608..734 | CDD:214597 | |||
EGF_Lam | 782..824 | CDD:238012 | |||
EGF_Lam | 831..888 | CDD:238012 | |||
Laminin_EGF | 897..939 | CDD:278482 | |||
LamB | 1003..1130 | CDD:214597 | |||
EGF_Lam | 1176..1225 | CDD:238012 | |||
EGF_Lam | 1227..1282 | CDD:238012 | |||
Laminin_EGF | 1293..1340 | CDD:278482 | |||
LamB | 1574..1699 | CDD:214597 | |||
EGF_Lam | 1746..1794 | CDD:238012 | |||
Laminin_EGF | 1796..1851 | CDD:278482 | |||
Ig_2 | 1866..1958 | CDD:290606 | 26/99 (26%) | ||
IG_like | 1866..1946 | CDD:214653 | 24/87 (28%) | ||
Ig3_Perlecan_like | 1954..2039 | CDD:143231 | 24/97 (25%) | ||
IG | 1961..2040 | CDD:214652 | 22/91 (24%) | ||
I-set | 2049..2133 | CDD:254352 | 24/103 (23%) | ||
Ig | 2063..2133 | CDD:299845 | 21/75 (28%) | ||
I-set | 2139..2225 | CDD:254352 | 20/89 (22%) | ||
IGc2 | 2153..2215 | CDD:197706 | 16/65 (25%) | ||
IG_like | 2240..2317 | CDD:214653 | 24/87 (28%) | ||
IGc2 | 2247..2307 | CDD:197706 | 20/70 (29%) | ||
IG | 2341..2418 | CDD:214652 | 21/85 (25%) | ||
IGc2 | 2348..2408 | CDD:197706 | 16/68 (24%) | ||
IG_like | 2434..2508 | CDD:214653 | 18/81 (22%) | ||
IGc2 | 2441..2500 | CDD:197706 | 18/66 (27%) | ||
IG_like | 2530..2607 | CDD:214653 | 19/90 (21%) | ||
IGc2 | 2537..2595 | CDD:197706 | 13/71 (18%) | ||
I-set | 2620..2703 | CDD:254352 | 21/96 (22%) | ||
IGc2 | 2633..2693 | CDD:197706 | 14/73 (19%) | ||
IG | 2731..2800 | CDD:214652 | 15/73 (21%) | ||
IGc2 | 2731..2790 | CDD:197706 | 11/63 (17%) | ||
IG_like | 2819..2896 | CDD:214653 | 11/79 (14%) | ||
IGc2 | 2826..2885 | CDD:197706 | 9/61 (15%) | ||
IG | 2916..2993 | CDD:214652 | 13/76 (17%) | ||
IGc2 | 2923..2983 | CDD:197706 | 10/59 (17%) | ||
IG | 3016..3093 | CDD:214652 | 11/98 (11%) | ||
IGc2 | 3023..3083 | CDD:197706 | 9/59 (15%) | ||
Ig_2 | 3112..3192 | CDD:290606 | 21/88 (24%) | ||
IG_like | 3115..3192 | CDD:214653 | 19/85 (22%) | ||
I-set | 3205..3291 | CDD:254352 | 18/87 (21%) | ||
ig | 3209..3289 | CDD:278476 | 16/81 (20%) | ||
IG | 3303..3385 | CDD:214652 | 15/94 (16%) | ||
Ig | 3313..3382 | CDD:143165 | 14/81 (17%) | ||
IG | 3404..3478 | CDD:214652 | 10/73 (14%) | ||
IGc2 | 3409..3468 | CDD:197706 | 9/58 (16%) | ||
I-set | 3482..3565 | CDD:254352 | 20/117 (17%) | ||
IGc2 | 3496..3555 | CDD:197706 | 15/93 (16%) | ||
IG_like | 3589..3666 | CDD:214653 | |||
Ig | 3600..3666 | CDD:299845 | |||
I-set | 3676..3755 | CDD:254352 | |||
IGc2 | 3686..3745 | CDD:197706 | |||
I-set | 3764..3841 | CDD:254352 | |||
Ig | 3779..3834 | CDD:299845 | |||
LamG | 3848..4008 | CDD:238058 | |||
EGF_CA | <4035..4064 | CDD:238011 | |||
LamG | 4117..4266 | CDD:238058 | |||
EGF | 4291..4321 | CDD:278437 | |||
EGF_CA | 4328..4359 | CDD:238011 | |||
LamG | 4386..4545 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |