Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001284756.1 | Gene: | sdk / 31017 | FlyBaseID: | FBgn0021764 | Length: | 2265 | Species: | Drosophila melanogaster |
Alignment Length: | 2378 | Identity: | 504/2378 - (21%) |
---|---|---|---|
Similarity: | 818/2378 - (34%) | Gaps: | 722/2378 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 ETSQFVNGLDLQGPIFLHEPPHRVEF-SNNSGGLIECSGHGSPPPEVEWTPIPPQQDMVFQLSNG 82
Fly 83 -------SMMFYPFTAEKYRHEVHATVYRCKLRNLVGTVLSRE----VHVRGVVNQKYAVQVHDE 136
Fly 137 YVMTGNTAVL------KCQVPSYMSEFVLVTAWVQDTGMHLYP-NTDIGGKYTVLSNGELYINNA 194
Fly 195 GPNDAYKSYTCRTVNRLTGEVQISTYPGRIIVTEPKGMVQPRINVEKHSMRHVVLNGQTTLPCIA 259
Fly 260 QGHPVPTYRWFKEENEQLLPLQLSERITIVSAGL-----------LKITKARLEDSGKYLCWVN- 312
Fly 313 NTAGEETIQVS--LTVTAPLTAHLQPQVQTV-DVDKDAQFQCIVSGHPVHDVNWLHDGKPI---L 371
Fly 372 RDNRVEILTDPPRLIIKKVQKEDPGMYQCFVSNE--------WEQIQS-TAELQLGD-ASPELL- 425
Fly 426 ------------------------YWFSEQ----------TLQPGPTVSLKCVATGNPLPQFTWS 456
Fly 457 LDGFPIPD-SSRFLVGQYVTIHDDVISHVNISNVKEEDGGEYTCTAQNAIGKVSHSAKVNIYGLP 520
Fly 521 YIREMP-KITGISGSDLIVKCPVAG-----YPIDKIHWERDGQ-TLPINRRQR--AYNNGTLIIE 576
Fly 577 QLQRLEDAGTYTCMAQN---KQKQTSRRNVEIQVLVPPKIMPIQAMTNMLREGMRAAISCQI--- 635
Fly 636 LEGDLPVS-FRWERN--------GKPLIGTGNEVFRRLDEYSAS---LVIEHISSDHSGNYTCIA 688
Fly 689 SNVAGTERFTVPLTV--------NVPPKWILEPKDSSAQAGADVLLHCQSSGYPTPTITWKKAIG 745
Fly 746 PTPGEYKDFLYEPTVQLFPNGTIF-----------------FKKISKESQGHFLCE--------- 784
Fly 785 ----AKNNIGSGV----SKVIFLKVNVPAHFQTKTKQISVAKGKQVHVQC-----NVQGDNPIDF 836
Fly 837 KWKIQATQQYLDESLDSRY--------TIRDQVLD---------DGM--VSELGISHTYRQDTGI 882
Fly 883 YICQASNAFGQDEMSIQLIVQEVPEQPKNLRINSQQSRSLQLTWSQPFAGNSPIEEYHIYYKQIS 947
Fly 948 DIWQNAEHLTIAGAQTVINIQQLR----------------------------------------- 971
Fly 972 ----------------------------------------------------------PAKAYHI 978
Fly 979 RMSAENKLGASEFSEVVQ-VTTLEEVPSGPPLAVRAEPKSSTEIFVTWDAPERDHWNGILLGYYV 1042
Fly 1043 GY-QMSLTPEDKEVNPTQGFSFKTVEVRSHFGGETVLANLNKFTQYHVIVQAYTSQGSGPPSKEI 1106
Fly 1107 AVQTMEDVPSSPPESPQCDVLGSTSIYITWSPPDIDGQNGKIKGYKVFYISVDE----LYETDPE 1167
Fly 1168 VVKSTNQYVTIENLRKYTNYTVWVLAYTKVGDG-MKTKPFYCRTHEDVPSAPQAIKAIPASSSKI 1231
Fly 1232 IISWLPPDLPNGDITGY--TFYM---SMLEGGREEGTHKRLLGPFVEMHETVRTQE---SATYQF 1288
Fly 1289 WLTASTKMGEG-------------EKTQVVTVP--PNNKVPARIVSFSQRIVTPWKEHL------ 1332
Fly 1333 ------------ELPCR---------KVG----------------------------------AP 1342
Fly 1343 A---------PVTIWRQDGHNMETSARKTIAKNG--------TLYMKECQASDAGNYTCSVENT- 1389
Fly 1390 ------WGKDEIV---------YNIVV---------------------KVP---PEAPNLTVINA 1415
Fly 1416 YTDSLLLEWMDNSHGGSPILGYVINY--------KRDNGDW-EELQVDSKT-TSHLLTNLWCGTR 1470
Fly 1471 YQLYITAYNKIGTGLPCDIVNSYTKGNPPVQPKH------------------------------- 1504
Fly 1505 --------------SQMITNNS-------------------TSV--------------------- 1515
Fly 1516 ------TCWLDS----WGDGGCG---ILYFMIESRVYGRSSWAVVSNHIPPTERIYTVS--DLVP 1565
Fly 1566 GTKYQLKVTAHNNAGSTTAIYNFTTLSTQGVIYNNDHSTPVSHLSDLPFYANFKLLLPICFSLLM 1630
Fly 1631 LLALIGAALFLRKRKLASQARLASSSMSESPSLANLQNKQNRDQQYLAVRCNPGTSAPRGSNSND 1695
Fly 1696 SGSFGKAEGNEYIEDICPYATFQLNKQTYSESSYSGNVYSGPYHSVRGSFVYH-DVKPESYHSKE 1759
Fly 1760 PEYTKVRRKVGRLRDPHSESQESDNPGSTDSEVRKILTLHIPITEYDTLGSESDNDVSARALNSA 1824
Fly 1825 K----YRAQRDTQDETS-----SSSETTPTSMTRKSKP 1853 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | 26/104 (25%) |
Ig strand A | 32..35 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 41..45 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 48..57 | CDD:409353 | 2/8 (25%) | ||
Ig strand D | 75..78 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 83..88 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 101..109 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 112..124 | CDD:409353 | 3/15 (20%) | ||
Ig | 235..326 | CDD:416386 | 25/104 (24%) | ||
Ig strand A | 235..238 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 244..248 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 251..258 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 266..271 | CDD:409353 | 0/4 (0%) | ||
Ig strand C' | 276..279 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 285..289 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 292..298 | CDD:409353 | 2/16 (13%) | ||
Ig strand F | 305..313 | CDD:409353 | 4/8 (50%) | ||
Ig strand G | 316..326 | CDD:409353 | 3/11 (27%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 25/100 (25%) | ||
Ig strand B | 347..351 | CDD:409549 | 1/3 (33%) | ||
Ig strand C | 360..364 | CDD:409549 | 1/3 (33%) | ||
Ig strand E | 383..387 | CDD:409549 | 1/3 (33%) | ||
Ig strand F | 397..402 | CDD:409549 | 3/4 (75%) | ||
Ig strand G | 410..413 | CDD:409549 | 0/3 (0%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 28/129 (22%) | ||
Ig strand B | 439..443 | CDD:409548 | 0/3 (0%) | ||
Ig strand C | 452..456 | CDD:409548 | 1/3 (33%) | ||
Ig strand E | 482..486 | CDD:409548 | 0/3 (0%) | ||
Ig strand F | 496..501 | CDD:409548 | 2/4 (50%) | ||
Ig strand G | 509..512 | CDD:409548 | 0/2 (0%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 29/98 (30%) | ||
Ig strand B | 536..540 | CDD:409550 | 0/3 (0%) | ||
Ig strand C | 549..553 | CDD:409550 | 0/3 (0%) | ||
Ig strand E | 571..575 | CDD:409550 | 2/3 (67%) | ||
Ig strand F | 586..591 | CDD:409550 | 2/4 (50%) | ||
Ig strand G | 600..603 | CDD:409550 | 1/2 (50%) | ||
Ig | 610..703 | CDD:416386 | 21/107 (20%) | ||
Ig strand A | 611..613 | CDD:409353 | 1/1 (100%) | ||
Ig strand A' | 620..624 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 627..636 | CDD:409353 | 1/11 (9%) | ||
Ig strand C | 641..648 | CDD:409353 | 3/7 (43%) | ||
Ig strand C' | 650..652 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 659..664 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 668..675 | CDD:409353 | 2/9 (22%) | ||
Ig strand F | 682..690 | CDD:409353 | 1/7 (14%) | ||
Ig strand G | 693..702 | CDD:409353 | 2/8 (25%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 22/128 (17%) | ||
Ig strand B | 724..728 | CDD:409546 | 0/3 (0%) | ||
Ig strand C | 737..741 | CDD:409546 | 0/3 (0%) | ||
Ig strand E | 766..770 | CDD:409546 | 2/20 (10%) | ||
Ig strand F | 780..785 | CDD:409546 | 2/17 (12%) | ||
Ig strand G | 794..797 | CDD:409546 | 2/2 (100%) | ||
Ig | 818..904 | CDD:416386 | 21/109 (19%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 1/11 (9%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 0/10 (0%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 1/12 (8%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 2/5 (40%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 1/7 (14%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 0/9 (0%) | ||
FN3 | 906..999 | CDD:238020 | 25/192 (13%) | ||
FN3 | 1006..1110 | CDD:238020 | 26/104 (25%) | ||
fn3 | 1117..1203 | CDD:394996 | 32/90 (36%) | ||
FN3 | 1215..1307 | CDD:238020 | 29/112 (26%) | ||
Ig | <1334..1401 | CDD:416386 | 24/142 (17%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 1/3 (33%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 3/12 (25%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 0/7 (0%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 3/15 (20%) | ||
FN3 | 1405..1494 | CDD:238020 | 29/98 (30%) | ||
FN3 | 1499..1580 | CDD:238020 | 30/180 (17%) | ||
sdk | NP_001284756.1 | Ig | 71..157 | CDD:299845 | 25/100 (25%) |
I-set | 72..150 | CDD:254352 | 24/92 (26%) | ||
Ig | 172..245 | CDD:299845 | 24/87 (28%) | ||
IG_like | 280..356 | CDD:214653 | 20/85 (24%) | ||
Ig | 280..343 | CDD:299845 | 17/72 (24%) | ||
IG_like | 375..450 | CDD:214653 | 21/75 (28%) | ||
Ig | 378..447 | CDD:143165 | 20/69 (29%) | ||
Ig | 506..587 | CDD:299845 | 25/88 (28%) | ||
IG_like | 506..587 | CDD:214653 | 25/88 (28%) | ||
I-set | 592..682 | CDD:254352 | 27/93 (29%) | ||
Ig | 595..682 | CDD:299845 | 26/90 (29%) | ||
FN3 | 686..789 | CDD:238020 | 21/110 (19%) | ||
FN3 | 798..893 | CDD:238020 | 22/127 (17%) | ||
FN3 | 901..1005 | CDD:238020 | 23/117 (20%) | ||
fn3 | 1011..1094 | CDD:278470 | 14/83 (17%) | ||
FN3 | 1108..1202 | CDD:238020 | 10/93 (11%) | ||
FN3 | 1210..1308 | CDD:238020 | 26/103 (25%) | ||
fn3 | 1317..1402 | CDD:278470 | 32/87 (37%) | ||
FN3 | 1415..1507 | CDD:238020 | 27/101 (27%) | ||
FN3 | 1513..1608 | CDD:238020 | 13/97 (13%) | ||
fn3 | 1617..1708 | CDD:278470 | 18/99 (18%) | ||
FN3 | 1722..1823 | CDD:238020 | 29/100 (29%) | ||
FN3 | 1828..1920 | CDD:238020 | 8/91 (9%) | ||
FN3 | 1927..2016 | CDD:238020 | 23/88 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 46 | 1.000 | Domainoid score | I8189 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |