Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009293555.1 | Gene: | ncam1a / 30447 | ZFINID: | ZDB-GENE-990415-31 | Length: | 1010 | Species: | Danio rerio |
Alignment Length: | 1193 | Identity: | 232/1193 - (19%) |
---|---|---|---|
Similarity: | 401/1193 - (33%) | Gaps: | 346/1193 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 324 LTVTAPLTAHLQPQVQTVDVDKDAQFQCIVSGHPVHDVNW-------LHDGKPILRDNRVEILTD 381
Fly 382 PPRLIIKKVQKEDPGMYQCFVSNEWEQIQSTAELQLGDASPELLYWF--SEQTLQPGPTVSLKCV 444
Fly 445 ATGNPLPQFTWSLDGFPI-PDSSRFLVGQYVTIHDDVIS--HVNISNVKEEDGGEYTCTAQ-NAI 505
Fly 506 GKVS-HSAKVNIYGLPYIR----EMPKITGISGSDLIVKCPVAGYPIDKIHWERDGQTLPINRRQ 565
Fly 566 RAYNNGTLIIEQLQRLEDAGTYTCMAQNKQKQTSRRNVEIQVLVPPKIMPIQAMTNMLREGMRAA 630
Fly 631 ISCQILEGDLPVSFRWERNGKPLIGTGNEVFRRLDEYSASLVIEHISSDHSGNYTCIASNVAGTE 695
Fly 696 RFTVPLTVNVPPKWILEPKDSSAQAGADVLLHCQSSGYPTPTITW----------KKAIGPTPGE 750
Fly 751 YKDFLYEPTVQLFPNGTIFFKKISKESQ-----------GHFLCEAKNNIGSGVSKVIFLKVNVP 804
Fly 805 AHFQTKTKQISVAKGKQVHVQCNVQGDNPIDFKWKIQATQQYLD-ESLDSRYTIRDQVLDDGMVS 868
Fly 869 ELGISHTYRQDTGIYICQASNAFGQDEMSIQLIVQEVPEQPKNLRINSQQSRSLQLTWSQP-FAG 932
Fly 933 NSPIEEYHIYYKQISDIWQNAEHLTIAGAQTVINIQQLRPAKAYHIRMSAENKLGASEFSEVVQV 997
Fly 998 TT---------LEEVPSG-PPLA-----------VRAEPKSS-TEIFVTWDAPERDHWNGILLGY 1040
Fly 1041 YVGYQMSLTPEDKEVNPTQGFSFKTVEVRSHFGGE-TVLANLNKFTQYHVIVQAYTSQGSGPPSK 1104
Fly 1105 EIAVQTMEDVPSSPPESPQCDVLGSTSIYITWSPPDIDGQNGKIKGYKV---------------- 1153
Fly 1154 -------FYISVDELYETDPEVVKSTNQYVTIENLRKYTNYTVWVLAYTKVGDGMKTKPFYCRTH 1211
Fly 1212 ED--------VPSAPQAIKAI-----PASSSKIIISWLPPDLPNGDITGYTFYMSMLEGGREEGT 1263
Fly 1264 HKRLLGPFVEMHETVRTQESATYQFWLTAS-----TKMGEGEKTQVV--TVPPNNKVPARIVSFS 1321
Fly 1322 QRIVTPWKEHLELPCRKVGAPAPVTIWRQDGHNMETSARKTIAKNGTLYMKECQASDAGNYTCSV 1386
Fly 1387 ENTWGKDEIVYNIVVKVPPEAPN 1409 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | |
Ig strand A | 32..35 | CDD:409353 | |||
Ig strand A' | 41..45 | CDD:409353 | |||
Ig strand B | 48..57 | CDD:409353 | |||
Ig strand D | 75..78 | CDD:409353 | |||
Ig strand E | 83..88 | CDD:409353 | |||
Ig strand F | 101..109 | CDD:409353 | |||
Ig strand G | 112..124 | CDD:409353 | |||
Ig | 235..326 | CDD:416386 | 1/1 (100%) | ||
Ig strand A | 235..238 | CDD:409353 | |||
Ig strand A' | 244..248 | CDD:409353 | |||
Ig strand B | 251..258 | CDD:409353 | |||
Ig strand C | 266..271 | CDD:409353 | |||
Ig strand C' | 276..279 | CDD:409353 | |||
Ig strand D | 285..289 | CDD:409353 | |||
Ig strand E | 292..298 | CDD:409353 | |||
Ig strand F | 305..313 | CDD:409353 | |||
Ig strand G | 316..326 | CDD:409353 | 1/1 (100%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 19/94 (20%) | ||
Ig strand B | 347..351 | CDD:409549 | 1/3 (33%) | ||
Ig strand C | 360..364 | CDD:409549 | 1/10 (10%) | ||
Ig strand E | 383..387 | CDD:409549 | 1/3 (33%) | ||
Ig strand F | 397..402 | CDD:409549 | 3/4 (75%) | ||
Ig strand G | 410..413 | CDD:409549 | 1/2 (50%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 24/100 (24%) | ||
Ig strand B | 439..443 | CDD:409548 | 0/3 (0%) | ||
Ig strand C | 452..456 | CDD:409548 | 0/3 (0%) | ||
Ig strand E | 482..486 | CDD:409548 | 2/5 (40%) | ||
Ig strand F | 496..501 | CDD:409548 | 3/4 (75%) | ||
Ig strand G | 509..512 | CDD:409548 | 0/3 (0%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 13/90 (14%) | ||
Ig strand B | 536..540 | CDD:409550 | 0/3 (0%) | ||
Ig strand C | 549..553 | CDD:409550 | 0/3 (0%) | ||
Ig strand E | 571..575 | CDD:409550 | 0/3 (0%) | ||
Ig strand F | 586..591 | CDD:409550 | 0/4 (0%) | ||
Ig strand G | 600..603 | CDD:409550 | 1/2 (50%) | ||
Ig | 610..703 | CDD:416386 | 18/92 (20%) | ||
Ig strand A | 611..613 | CDD:409353 | 0/1 (0%) | ||
Ig strand A' | 620..624 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 627..636 | CDD:409353 | 0/8 (0%) | ||
Ig strand C | 641..648 | CDD:409353 | 1/6 (17%) | ||
Ig strand C' | 650..652 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 659..664 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 668..675 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 682..690 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 693..702 | CDD:409353 | 2/8 (25%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 23/115 (20%) | ||
Ig strand B | 724..728 | CDD:409546 | 1/3 (33%) | ||
Ig strand C | 737..741 | CDD:409546 | 2/13 (15%) | ||
Ig strand E | 766..770 | CDD:409546 | 1/3 (33%) | ||
Ig strand F | 780..785 | CDD:409546 | 2/4 (50%) | ||
Ig strand G | 794..797 | CDD:409546 | 0/2 (0%) | ||
Ig | 818..904 | CDD:416386 | 18/86 (21%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 0/6 (0%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 1/2 (50%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 0/3 (0%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 2/5 (40%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 4/7 (57%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 2/9 (22%) | ||
FN3 | 906..999 | CDD:238020 | 21/93 (23%) | ||
FN3 | 1006..1110 | CDD:238020 | 24/117 (21%) | ||
fn3 | 1117..1203 | CDD:394996 | 18/108 (17%) | ||
FN3 | 1215..1307 | CDD:238020 | 15/103 (15%) | ||
Ig | <1334..1401 | CDD:416386 | 9/66 (14%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 0/4 (0%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 1/7 (14%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 0/6 (0%) | ||
FN3 | 1405..1494 | CDD:238020 | 4/5 (80%) | ||
FN3 | 1499..1580 | CDD:238020 | |||
ncam1a | XP_009293555.1 | Ig | 20..112 | CDD:299845 | 19/97 (20%) |
I-set | 21..111 | CDD:254352 | 18/92 (20%) | ||
IG_like | 121..200 | CDD:214653 | 21/87 (24%) | ||
IGc2 | 128..189 | CDD:197706 | 17/69 (25%) | ||
Ig | 208..301 | CDD:299845 | 33/190 (17%) | ||
IG_like | 219..298 | CDD:214653 | 27/176 (15%) | ||
Ig | 300..406 | CDD:299845 | 24/116 (21%) | ||
IG_like | 308..406 | CDD:214653 | 21/108 (19%) | ||
ig | 413..498 | CDD:278476 | 18/92 (20%) | ||
IG_like | 415..498 | CDD:214653 | 17/89 (19%) | ||
fn3 | 505..589 | CDD:278470 | 19/85 (22%) | ||
FN3 | 624..715 | CDD:238020 | 22/105 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |