Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001024582.1 | Gene: | him-4 / 181187 | WormBaseID: | WBGene00001863 | Length: | 5198 | Species: | Caenorhabditis elegans |
Alignment Length: | 2133 | Identity: | 454/2133 - (21%) |
---|---|---|---|
Similarity: | 719/2133 - (33%) | Gaps: | 644/2133 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 VEFSNNSGGLIECSGHGSPPPEVEWT----PIPPQQDMVFQLSNGSMMFYPFTAEKYRHEVHATV 102
Fly 103 YRCKLRNLVG-TVLSREVHVR-------GVVNQKYAVQVHDEYVMTGNTAVLKCQVPSYMSEFVL 159
Fly 160 VTAWVQDTGMHLYPNTDIGGKYTVLSNGELYINNAGPNDAYKSYTCRTVNRLTGEVQISTYPGRI 224
Fly 225 IVTEPKGMVQPRINVEKHSMRHVVLNGQTTLPCIAQGHPVPTYRWFKEENEQLLPLQLSERITIV 289
Fly 290 SAG-LLKITKARLEDSGKYLCWVNNTAGEETIQVSLTV---TAPLTAHLQPQVQTVDVDKDAQFQ 350
Fly 351 CIVSGHPVHD-------VNWLHDGKPI---LRDNRVEILTDPPRLIIKKVQKEDPGMYQCFVSNE 405
Fly 406 WEQIQSTAELQLGDASPELLYWFSE---QTLQPGPTVSLKCVATGNPLPQFTWSLDGFPIPDSSR 467
Fly 468 FLVGQYVTIHDDVI-------SHVNISNVKEEDGGEYTCTAQNAIGKVSHSAKVNIYGLP----- 520
Fly 521 --------------------YIREMPKITGISG-----SDLIVK--------------------- 539
Fly 540 ---------------------------------------------CPVAGYPIDKIHWERDGQTL 559
Fly 560 PINRRQRAYNNGTLIIEQLQRLE--DAGTYTCMAQNKQKQTSRRNVEIQVLVPPKIMPIQAMTNM 622
Fly 623 LREGMRAAISCQILEGDLPVSFRWERNGKPLIGTGNEVFRRLDEY----SASLVIEHISS--DHS 681
Fly 682 GNYTCIASNVAGTERFTVPLTVNVPPKWILEPKDSSAQAGA-----DVLLHCQSSGYPTPTITW- 740
Fly 741 --KKAIGPTPGEYKDFLYEPTVQLFPNG-TIFFKKISKESQGHFLCEAKNNIGSGVSKVIFLKVN 802
Fly 803 VPAHFQTKTKQISVAKGKQVHVQCNVQGDNPI-DFKWKIQATQQYLDES-----LDSRYTIRDQV 861
Fly 862 LDDGMVSELGISHTYRQDTGIYICQASNAFGQDEMSIQLIVQEVP---EQPKNLRINSQQSRSLQ 923
Fly 924 LTWSQPFAGNSPIEEYHIYYKQISDIWQNAEHLTIAGAQTVINIQQLRPAKAYHIRMS--AENKL 986
Fly 987 GASEFSEVVQVTTLE---------EVPSGPPLAVRAEPKSSTEIFVTW----------DAPERDH 1032
Fly 1033 WNGILLGYYVGYQMSLTPEDKEVNPTQGFSFKTVEVRSHFGGETVLANLNKFTQYHVIVQAYTSQ 1097
Fly 1098 GSGPPSKEIAVQTMEDVPSSPPESPQCDVLGSTSIYITWSPPDIDGQNGKIKGYKVFYISVDELY 1162
Fly 1163 ETDPEVVKSTNQYVTIENLRKYTNYTVWVLAYTKVGDGMKTKPFYCRTHEDVPSAPQAIKAIPAS 1227
Fly 1228 SSKIIISWLPPDLPNGDITGYTFYMSMLEGGREEGTHKRLLGPFVEMHETVRTQESATYQFWLTA 1292
Fly 1293 STKMGEGEKTQVVTVPPNNKVPARIVSFSQRIVTPWKEHLELPCRKVGAPAPVTIWRQDGHNMET 1357
Fly 1358 SARKTIAKNGTLYMKECQASDAGNYTCSVENTWGKDEIVYNIVVKVPPEAPNLTVINAYTDSLLL 1422
Fly 1423 EWMDNS----H---GGSPILGYVINYKRDNGDWEE----LQVDSKTTSHLLTNLWCGTRYQLYIT 1476
Fly 1477 AYNKIGTGLPCDIVNSYTKGNPPVQPKHS---QMITNNSTSVTCWLD-------SWGDGG----- 1526
Fly 1527 --------------------CGILYFMIESRVYGRSSW---------------------AVVSNH 1550
Fly 1551 I----------PPTERIYTVSDLVPG-------TKYQLKVT-------------AHNNAGSTTAI 1585
Fly 1586 Y------NFTTLSTQGVIY---NNDHSTPVSHLSD--LPFYANFKLLLPICFSLLMLLALIGAAL 1639
Fly 1640 FLRKRKLASQARLASSSMSES--------------PSLANLQNKQNRDQQYLAV-------RCNP 1683
Fly 1684 GTSAPRGS----------NSNDSGSFGKAEGNEYIEDICPYATFQL-NKQTYSESSYSGNVYSGP 1737
Fly 1738 YHSVRGSFVYHDVKPESYHSKEPEYTKVRRKVGRLRDPHSESQESDNPGSTDSEVRKILTLHIPI 1802
Fly 1803 TEYDTLGSESDNDVS----ARALNSAKYRAQRDTQDETSSSSETTPTSMTRKS 1851 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | 25/93 (27%) |
Ig strand A | 32..35 | CDD:409353 | |||
Ig strand A' | 41..45 | CDD:409353 | 1/2 (50%) | ||
Ig strand B | 48..57 | CDD:409353 | 1/8 (13%) | ||
Ig strand D | 75..78 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 83..88 | CDD:409353 | 0/4 (0%) | ||
Ig strand F | 101..109 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 112..124 | CDD:409353 | 6/19 (32%) | ||
Ig | 235..326 | CDD:416386 | 26/91 (29%) | ||
Ig strand A | 235..238 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 244..248 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 251..258 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 266..271 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 276..279 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 285..289 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 292..298 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 305..313 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 316..326 | CDD:409353 | 3/9 (33%) | ||
IgC2_3_Dscam | 329..417 | CDD:409549 | 23/97 (24%) | ||
Ig strand B | 347..351 | CDD:409549 | 1/3 (33%) | ||
Ig strand C | 360..364 | CDD:409549 | 1/10 (10%) | ||
Ig strand E | 383..387 | CDD:409549 | 2/3 (67%) | ||
Ig strand F | 397..402 | CDD:409549 | 2/4 (50%) | ||
Ig strand G | 410..413 | CDD:409549 | 0/2 (0%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 31/103 (30%) | ||
Ig strand B | 439..443 | CDD:409548 | 2/3 (67%) | ||
Ig strand C | 452..456 | CDD:409548 | 1/3 (33%) | ||
Ig strand E | 482..486 | CDD:409548 | 0/3 (0%) | ||
Ig strand F | 496..501 | CDD:409548 | 3/4 (75%) | ||
Ig strand G | 509..512 | CDD:409548 | 0/2 (0%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 31/184 (17%) | ||
Ig strand B | 536..540 | CDD:409550 | 2/69 (3%) | ||
Ig strand C | 549..553 | CDD:409550 | 1/3 (33%) | ||
Ig strand E | 571..575 | CDD:409550 | 1/3 (33%) | ||
Ig strand F | 586..591 | CDD:409550 | 3/4 (75%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 25/98 (26%) | ||
Ig strand A | 611..613 | CDD:409353 | 1/1 (100%) | ||
Ig strand A' | 620..624 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 627..636 | CDD:409353 | 1/8 (13%) | ||
Ig strand C | 641..648 | CDD:409353 | 2/6 (33%) | ||
Ig strand C' | 650..652 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 659..664 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 668..675 | CDD:409353 | 1/6 (17%) | ||
Ig strand F | 682..690 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 693..702 | CDD:409353 | 2/8 (25%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 28/103 (27%) | ||
Ig strand B | 724..728 | CDD:409546 | 1/3 (33%) | ||
Ig strand C | 737..741 | CDD:409546 | 1/6 (17%) | ||
Ig strand E | 766..770 | CDD:409546 | 2/4 (50%) | ||
Ig strand F | 780..785 | CDD:409546 | 1/4 (25%) | ||
Ig strand G | 794..797 | CDD:409546 | 1/2 (50%) | ||
Ig | 818..904 | CDD:416386 | 21/91 (23%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 0/6 (0%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 1/2 (50%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 1/3 (33%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 0/5 (0%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 4/7 (57%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 2/9 (22%) | ||
FN3 | 906..999 | CDD:238020 | 25/97 (26%) | ||
FN3 | 1006..1110 | CDD:238020 | 19/113 (17%) | ||
fn3 | 1117..1203 | CDD:394996 | 10/85 (12%) | ||
FN3 | 1215..1307 | CDD:238020 | 15/91 (16%) | ||
Ig | <1334..1401 | CDD:416386 | 18/66 (27%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 1/3 (33%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 0/6 (0%) | ||
FN3 | 1405..1494 | CDD:238020 | 17/99 (17%) | ||
FN3 | 1499..1580 | CDD:238020 | 28/166 (17%) | ||
him-4 | NP_001024582.1 | IG_like | 442..515 | CDD:214653 | |
IG | 527..605 | CDD:214652 | |||
Ig | 628..694 | CDD:319273 | |||
I-set | 702..789 | CDD:369462 | |||
I-set | 793..881 | CDD:369462 | |||
Ig | 899..974 | CDD:386229 | |||
I-set | 1012..1081 | CDD:369462 | |||
Ig | 1109..1172 | CDD:319273 | |||
Ig | 1196..1263 | CDD:319273 | |||
IG_like | 1277..1358 | CDD:214653 | |||
I-set | 1373..1450 | CDD:369462 | |||
Ig | 1474..1544 | CDD:386229 | |||
IGc2 | 1563..1628 | CDD:197706 | |||
Ig | 1651..1732 | CDD:386229 | |||
Ig | 1755..1818 | CDD:319273 | |||
Ig | 1839..1912 | CDD:386229 | |||
Ig | 1930..2002 | CDD:386229 | 22/79 (28%) | ||
IG_like | 2014..2095 | CDD:214653 | 20/98 (20%) | ||
Ig | 2094..2182 | CDD:386229 | 27/99 (27%) | ||
Ig | 2190..2283 | CDD:386229 | 23/99 (23%) | ||
I-set | 2296..2380 | CDD:369462 | 30/93 (32%) | ||
Ig | 2384..2471 | CDD:386229 | 10/86 (12%) | ||
IGc2 | 2492..2556 | CDD:197706 | 20/65 (31%) | ||
Ig | 2580..2654 | CDD:386229 | 21/79 (27%) | ||
Ig | 2686..2753 | CDD:319273 | 23/76 (30%) | ||
IG_like | 2768..2850 | CDD:214653 | 19/95 (20%) | ||
I-set | 2854..2939 | CDD:369462 | 24/95 (25%) | ||
IG_like | 2951..3031 | CDD:214653 | 20/117 (17%) | ||
I-set | 3046..3116 | CDD:369462 | 22/132 (17%) | ||
I-set | 3127..3213 | CDD:369462 | 21/85 (25%) | ||
Ig | 3217..3292 | CDD:386229 | 17/93 (18%) | ||
I-set | 3300..3386 | CDD:369462 | 15/85 (18%) | ||
I-set | 3396..3472 | CDD:369462 | 16/75 (21%) | ||
I-set | 3481..3569 | CDD:369462 | 15/87 (17%) | ||
I-set | 3591..3663 | CDD:369462 | 18/88 (20%) | ||
Ig | 3667..3762 | CDD:386229 | 20/96 (21%) | ||
Ig | 3775..3848 | CDD:386229 | |||
Ig | 3859..3947 | CDD:386229 | |||
IGc2 | 3968..4031 | CDD:197706 | |||
Ig_3 | 4045..4119 | CDD:372822 | |||
Ig_3 | 4136..4210 | CDD:372822 | |||
Ig | <4262..4314 | CDD:386229 | |||
Ig | 4318..4406 | CDD:386229 | |||
IG_like | 4418..4496 | CDD:214653 | |||
I-set | 4570..4654 | CDD:369462 | |||
I-set | 4752..4836 | CDD:369462 | |||
EGF_CA | 4996..5027 | CDD:238011 | |||
EGF_CA | 5034..5076 | CDD:214542 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |