Sequence 1: | NP_001261571.1 | Gene: | Dscam4 / 2769008 | FlyBaseID: | FBgn0263219 | Length: | 1935 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006510118.1 | Gene: | Ncam1 / 17967 | MGIID: | 97281 | Length: | 1162 | Species: | Mus musculus |
Alignment Length: | 1167 | Identity: | 248/1167 - (21%) |
---|---|---|---|
Similarity: | 407/1167 - (34%) | Gaps: | 299/1167 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 402 VSNEWEQIQSTAELQL-----------GDASPELLYWFSEQTLQPGPTVSLKCVATGNPLPQFTW 455
Fly 456 SLDGFPIPDSSRFLVGQYVTIHDDVISHVNISNVKEEDGGEYTC-------TAQNAIGKVSHSAK 513
Fly 514 VNIYGLPYIREMPKITGISGSDLIVKCPVAGYPIDKIHWERDGQTLPINRRQR--AYNNGTLIIE 576
Fly 577 QLQRLEDAGTYTCMAQNKQK-QTSRRNVEIQVLVPPKIMPIQAMTNMLRE-GMRAAISCQILEGD 639
Fly 640 LPVSFRWERNGKPLIGTGNEVFRRL-DEYSASLVIEHISSDHSGNYTCIASNVAGTERFTVPLTV 703
Fly 704 NVPPKWILEPKDSSAQAGADVLLHCQSSGYPTPTITWKKAIGPTPGEYKDFLYEPTVQLFPNG-- 766
Fly 767 ---------TIFFKKISKESQGHFLCEAKNNIGSGVSKVIFLKVNVPAHFQTKTKQISVAKGKQV 822
Fly 823 HVQCNVQGDNPIDFKWKIQATQQYLDESL--DSRYTIRDQVLDDGMVSELGISHTYRQDTGIYIC 885
Fly 886 QASNAFGQDEMSIQLIVQEVPEQPKNLRINSQQSRSLQLTWSQPFA-GNSPIEEYHIYYKQISD- 948
Fly 949 ----IWQNAEHLTIAGAQTVINIQQLRPAKAYHIRMSAENKLGASEFSEVVQVTTLEEVPSGPPL 1009
Fly 1010 AVRAEPKSSTEIF------VTWDAP---------------------------------ERDHWNG 1035
Fly 1036 ILLGYYVGYQMSLTPEDKEVNPTQGFSFKTVEVRSHFGGETV-LANLNKFTQYHVIVQAYTSQGS 1099
Fly 1100 GPPSKEIAVQTMEDVPSSPPE--SP--------------------------------QCDVLGST 1130
Fly 1131 SIYITW-SPPDIDGQNGKIKGYKVFYISVDELYE-----------------------------TD 1165
Fly 1166 PEVVKSTNQYVTIEN-LRKYTNYTVWVLAYTKVGDGMKTKPFYCRTHEDVPSAPQAIKAIPASSS 1229
Fly 1230 KIIISWLPPDLPNGDIT---GYTFYMSMLEGGREEGTHKRLLGPFVEMHETVRTQESAT------ 1285
Fly 1286 ---YQFWLTASTKMGEGEKTQVVTVPPNNKV-PARIVSFSQRIVTPWKEHLELPCRKVGAPAPVT 1346
Fly 1347 IWRQDGHNMETSARKTIAKNGTLYMKECQASDAGNYTCSVENTWGKD-EIVYNIVVKVPPEA 1407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam4 | NP_001261571.1 | Ig | 31..124 | CDD:416386 | |
Ig strand A | 32..35 | CDD:409353 | |||
Ig strand A' | 41..45 | CDD:409353 | |||
Ig strand B | 48..57 | CDD:409353 | |||
Ig strand D | 75..78 | CDD:409353 | |||
Ig strand E | 83..88 | CDD:409353 | |||
Ig strand F | 101..109 | CDD:409353 | |||
Ig strand G | 112..124 | CDD:409353 | |||
Ig | 235..326 | CDD:416386 | |||
Ig strand A | 235..238 | CDD:409353 | |||
Ig strand A' | 244..248 | CDD:409353 | |||
Ig strand B | 251..258 | CDD:409353 | |||
Ig strand C | 266..271 | CDD:409353 | |||
Ig strand C' | 276..279 | CDD:409353 | |||
Ig strand D | 285..289 | CDD:409353 | |||
Ig strand E | 292..298 | CDD:409353 | |||
Ig strand F | 305..313 | CDD:409353 | |||
Ig strand G | 316..326 | CDD:409353 | |||
IgC2_3_Dscam | 329..417 | CDD:409549 | 4/14 (29%) | ||
Ig strand B | 347..351 | CDD:409549 | |||
Ig strand C | 360..364 | CDD:409549 | |||
Ig strand E | 383..387 | CDD:409549 | |||
Ig strand F | 397..402 | CDD:409549 | 248/1167 (21%) | ||
Ig strand G | 410..413 | CDD:409549 | 1/2 (50%) | ||
IgI_4_Dscam | 422..516 | CDD:409548 | 21/100 (21%) | ||
Ig strand B | 439..443 | CDD:409548 | 1/3 (33%) | ||
Ig strand C | 452..456 | CDD:409548 | 0/3 (0%) | ||
Ig strand E | 482..486 | CDD:409548 | 1/3 (33%) | ||
Ig strand F | 496..501 | CDD:409548 | 2/11 (18%) | ||
Ig strand G | 509..512 | CDD:409548 | 0/2 (0%) | ||
IgI_5_Dscam | 520..607 | CDD:409550 | 18/89 (20%) | ||
Ig strand B | 536..540 | CDD:409550 | 0/3 (0%) | ||
Ig strand C | 549..553 | CDD:409550 | 1/3 (33%) | ||
Ig strand E | 571..575 | CDD:409550 | 1/3 (33%) | ||
Ig strand F | 586..591 | CDD:409550 | 3/4 (75%) | ||
Ig strand G | 600..603 | CDD:409550 | 0/2 (0%) | ||
Ig | 610..703 | CDD:416386 | 21/94 (22%) | ||
Ig strand A | 611..613 | CDD:409353 | 1/1 (100%) | ||
Ig strand A' | 620..624 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 627..636 | CDD:409353 | 1/8 (13%) | ||
Ig strand C | 641..648 | CDD:409353 | 1/6 (17%) | ||
Ig strand C' | 650..652 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 659..664 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 668..675 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 682..690 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 693..702 | CDD:409353 | 1/8 (13%) | ||
IgI_7_Dscam | 706..801 | CDD:409546 | 27/105 (26%) | ||
Ig strand B | 724..728 | CDD:409546 | 2/3 (67%) | ||
Ig strand C | 737..741 | CDD:409546 | 2/3 (67%) | ||
Ig strand E | 766..770 | CDD:409546 | 1/14 (7%) | ||
Ig strand F | 780..785 | CDD:409546 | 1/4 (25%) | ||
Ig strand G | 794..797 | CDD:409546 | 1/2 (50%) | ||
Ig | 818..904 | CDD:416386 | 21/87 (24%) | ||
putative Ig strand B | 820..827 | CDD:409353 | 2/6 (33%) | ||
putative Ig strand C | 835..841 | CDD:409353 | 1/5 (20%) | ||
putative Ig strand C' | 853..856 | CDD:409353 | 1/2 (50%) | ||
putative Ig strand D | 862..866 | CDD:409353 | 0/3 (0%) | ||
putative Ig strand E | 868..874 | CDD:409353 | 2/5 (40%) | ||
putative Ig strand F | 881..889 | CDD:409353 | 4/7 (57%) | ||
putative Ig strand G | 892..902 | CDD:409353 | 3/9 (33%) | ||
FN3 | 906..999 | CDD:238020 | 25/98 (26%) | ||
FN3 | 1006..1110 | CDD:238020 | 28/143 (20%) | ||
fn3 | 1117..1203 | CDD:394996 | 23/150 (15%) | ||
FN3 | 1215..1307 | CDD:238020 | 22/103 (21%) | ||
Ig | <1334..1401 | CDD:416386 | 11/67 (16%) | ||
Ig strand C | 1345..1349 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 1363..1366 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 1367..1372 | CDD:409353 | 0/4 (0%) | ||
Ig strand F | 1380..1388 | CDD:409353 | 0/7 (0%) | ||
Ig strand G | 1394..1401 | CDD:409353 | 1/6 (17%) | ||
FN3 | 1405..1494 | CDD:238020 | 3/3 (100%) | ||
FN3 | 1499..1580 | CDD:238020 | |||
Ncam1 | XP_006510118.1 | Ig1_NCAM-1 | 20..115 | CDD:143273 | 25/124 (20%) |
IG | 124..190 | CDD:214652 | 17/71 (24%) | ||
Ig3_NCAM-1_like | 211..308 | CDD:143207 | 22/97 (23%) | ||
Ig_NCAM-1 | 307..413 | CDD:143277 | 27/106 (25%) | ||
Ig_3 | 417..494 | CDD:372822 | 18/85 (21%) | ||
FN3 | 509..606 | CDD:238020 | 25/100 (25%) | ||
fn3 | 649..731 | CDD:365830 | 19/93 (20%) | ||
PHA03247 | <905..1140 | CDD:223021 | 46/205 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |