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Protein Alignment Dscam4 and Papln

DIOPT Version :9

Sequence 1:	NP_001261571.1	Gene:	Dscam4 / 2769008	FlyBaseID:	FBgn0263219	Length:	1935	Species:	Drosophila melanogaster
Sequence 2:	NP_001192272.1	Gene:	Papln / 170721	MGIID:	2386139	Length:	1302	Species:	Mus musculus

Alignment Length:	381	Identity:	96/381 - (25%)
Similarity:	152/381 - (39%)	Gaps:	100/381 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   363 WLHDGKPILRDNRVEILTDPPRLIIKKVQKEDPGMYQCFVSNEWEQIQSTAELQL----GDAS-- 421
            |..:|:|| ..||.::..| ..|||.:::.||.|:|.|.......:.|   |:||    ||.:
Mouse   960 WQKEGRPI-SSNRYQLQAD-GSLIISRLRPEDAGIYSCGSHRPGHEPQ---EIQLRVTGGDMAVF 1019

  Fly   422 PELLYWFSEQTLQPGPTVSLKCVATGNPLPQFTWSLDGFPIPDSSRFLVGQYVTIHDDVISHVNI 486
            ||                       |.|        ..||.|             .:..:.|
Mouse  1020 PE-----------------------GQP--------RHFPEP-------------RNPDLGH--- 1037

  Fly   487 SNVKEEDGGEYTCTAQNAIG----KVSHSAKVNIYGLPYIREMPKITGIS-GSDLIVKCPVAGYP 546
                   |..:..|...|.|    ..||........|.  |..|.:...| |..:.:.|...|:|
Mouse  1038 -------GPPHRGTGAEAGGHRVLSPSHPRPATRLRLD--RTQPGVVDASPGQRIRLTCRAEGFP 1093

  Fly   547 IDKIHWERDGQTLPINRRQRAYNNGTLIIEQLQRLEDAGTYTCMAQNKQKQTSRRNVEIQVL--- 608
            :..|.|:|||| |..:.|.:...:|:|:|.::. :||.|.|:|:|.|.|.: .:|.|:::||
Mouse  1094 VPTIEWQRDGQ-LVSSPRHQVQPDGSLVISRVD-VEDGGYYSCVAFNGQDR-DQRWVQLRVLREL 1155

  Fly   609 ----VPPKIMPIQAMTNMLREGMRAAISCQILEGDLPVSFRWERNGKPLIGTGNEVFRRLDEYSA 669
                :||.:        .:.||..|.:.| ::.|: .|:.||.|||.|:...|:.|.:..|   .
Mouse  1156 TITGLPPAV--------TVAEGDTARLLC-VVAGE-SVNIRWSRNGLPIQADGHRVHQSPD---G 1207

  Fly   670 SLVIEHISSDHSGNYTCIASNVAGTERFTVPLTVNVPPKWILEPKDSSAQAGADVL 725
            :|:|.::.....|:|||.|...:.....:..:.|.:|     .|...|...|.|.:
Mouse  1208 TLLIHNLRPRDEGSYTCSAFRGSQAVSRSTEVKVALP-----APAAQSRDLGKDCI 1258

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.