DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33234 and Sv2a

DIOPT Version :9

Sequence 1:NP_001097483.2 Gene:CG33234 / 2769006 FlyBaseID:FBgn0053234 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_071313.1 Gene:Sv2a / 64051 MGIID:1927139 Length:742 Species:Mus musculus


Alignment Length:580 Identity:111/580 - (19%)
Similarity:207/580 - (35%) Gaps:167/580 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DEVFTKLGFGKMQ----FIILLSCF--NLQIWMTNEQLGFGVIIAGASCEMRIHDRRLAWLMAAS 63
            :.:..:.|.|:.|    |::.|:..  .:::::.      |.::..|..:|.:.|.....|....
Mouse   153 ETILRECGHGRFQWTLYFVLGLALMADGVEVFVV------GFVLPSAEKDMCLSDSNKGMLGLIV 211

  Fly    64 FAAQMVSCFLWGELADVYGRRKIIMITSTVANIVSILSACVPEFWGFLFLRSVGGFFIAASVVSL 128
            :...||..||||.|||..|||:.::|:.:|.::.:..|:.|..:..|||.|.:.|..|..|:..:
Mouse   212 YLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIV 276

  Fly   129 MTYLSEFTKISLRPRVLTIMSFSLGVSMIYVPCLAGVLLP---------LRTEPSSWRILLLCNQ 184
            .:|.|||.....|...|:.:.....:..:|...:|..::|         ...:..|||:.:|...
Mouse   277 FSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCA 341

  Fly   185 VPGIIGIIILVFLPESPKYYLSINNQEKAMQVMEKICRMN---KGKKVTLNSL-GVESLTQ-PRL 244
            .|.:..|..|...||||:::|.....::|..|::::...|   ||....:.|: .::::.| ..|
Mouse   342 FPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDEL 406

  Fly   245 RQPTEKHGSCYET-KVLLLNHAKIMWFFFI----------------IFFSLSGLGFALPIWMLRV 292
            .:.....|:.|:. .|..|:....:|..|:                ::|::|...:.|.:|    
Mouse   407 IEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFSPEYRRITLMMMGVWFTMSFSYYGLTVW---- 467

  Fly   293 RVLTATFTDWDTMCSHLDGIKADS-----PGRTECHLTYEQMTDPMIH----------------- 335
                  |.|   |..||..:...:     ||....|:|:....:..||                 
Mouse   468 ------FPD---MIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKS 523

  Fly   336 ----------------------------------------------------------GC----- 337
                                                                      ||     
Mouse   524 VSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHNKEGCPLDVT 588

  Fly   338 ------------------VVLALFVVTSVILTWLSRRWVIIGYICISIIGCVALNF--MEHPNLI 382
                              .||...:|:::::..:.|..::.|...:|.:.|..|:|  .|...:.
Mouse   589 GTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVLSCVSCFFLSFGNSESAMIA 653

  Fly   383 LISFFAIIDPLICSVRLAGSMLIDLVPTHLRGKVF----ALISMTGRAGILITSVYVGYT 438
            |:..|..:.  |.|......:.::|.|:..|...|    ||..:....||.|.:.:||.|
Mouse   654 LLCLFGGVS--IASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGIT 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33234NP_001097483.2 MFS 56..>198 CDD:119392 40/150 (27%)
Sv2aNP_071313.1 synapt_SV2 1..742 CDD:130366 111/580 (19%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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