DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33234 and sv2a

DIOPT Version :9

Sequence 1:NP_001097483.2 Gene:CG33234 / 2769006 FlyBaseID:FBgn0053234 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_696434.2 Gene:sv2a / 568033 ZFINID:ZDB-GENE-131001-1 Length:733 Species:Danio rerio


Alignment Length:581 Identity:110/581 - (18%)
Similarity:207/581 - (35%) Gaps:170/581 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DEVFTKLGFGKMQ----FIILLSCF--NLQIWMTNEQLGFGVIIAGASCEMRIHDRRLAWLMAAS 63
            :.:..:.|.|:.|    |::.|:..  .::|::.      |.::..|..:|.:.:.....|....
Zfish   145 ETILQECGHGRFQWTLYFVLGLALMADGVEIFVV------GFVLPSAEKDMCLSEPNKGMLGLIV 203

  Fly    64 FAAQMVSCFLWGELADVYGRRKIIMITSTVANIVSILSACVPEFWGFLFLRSVGGFFIAASVVSL 128
            :...||..|:||.|||..|||:.::|:.::.::.:..|:.|..:..|||.|.:.|..|..|:..:
Zfish   204 YLGMMVGAFVWGGLADRIGRRQTLLISLSINSVFAFFSSFVQGYSSFLFCRLLSGVGIGGSIPIV 268

  Fly   129 MTYLSEFTKISLRPRVLTIMSFSLGVSMIYVPCLAGVLLP---------LRTEPSSWRILLLCNQ 184
            .:|.|||.....|...|:.:.....:..||...:|..::|         ...:..|||:.:|...
Zfish   269 FSYYSEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCA 333

  Fly   185 VPGIIGIIILVFLPESPKYYLSINNQEKAMQVMEKICRMN-KGKKVTLNSLGVESL-TQPRLRQP 247
            .|.:..|..|..:||||::||.....::|..:::::...| :.|........|.:: |..::.:.
Zfish   334 FPSVAAIAALTTMPESPRFYLENGKHDEAWMILKQVHDTNMRAKGYPERVFSVTTIKTVKQMDEL 398

  Fly   248 TEKHGSC------YETKVLLLNH--------------AKIMWFFFIIFFSLSGLGFALPIWMLRV 292
            .:..|..      :..|:..|.|              .:|.:....::||:|...:.|.:|    
Zfish   399 VDMGGEATAWHQRWRIKLTNLFHQVWGNFLTVFNPEYRRITYMMMAVWFSMSFSYYGLTVW---- 459

  Fly   293 RVLTATFTDWDTMCSHLDGIKADSPGRTEC-------HLTYEQMTDPMIH--------------- 335
                  |.|   |..:|.  |.:...||:.       |:|:....:..||               
Zfish   460 ------FPD---MIKYLQ--KQEYSSRTKVFIKEKVEHVTFNFTLENQIHRNGEYFNNKFLNLKM 513

  Fly   336 ------------------------------------------------------------GCVV- 339
                                                                        ||:: 
Zfish   514 KSMVFEDSLFEECYFEDITSSNTFFRNCTFISTLFYNTDLFKYRLINSKLINSTFLHNKEGCMLD 578

  Fly   340 ------------------LALF---VVTSVILTWLSRRWVIIGYICISIIGCVALNF--MEHPNL 381
                              ||:.   :|:::::..:.|..::.|...||.:.|..|:|  .|...:
Zfish   579 FSDENNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVISCVSCFFLSFGNSESAMI 643

  Fly   382 ILISFFAIIDPLICSVRLAGSMLIDLVPTHLRGKVF----ALISMTGRAGILITSVYVGYT 438
            .|:..|..|.  |.|......:.::|.|:..|...|    ||..:....||.|...:||.|
Zfish   644 ALLCLFGGIS--IASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFQSFVGIT 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33234NP_001097483.2 MFS 56..>198 CDD:119392 39/150 (26%)
sv2aXP_696434.2 synapt_SV2 1..733 CDD:130366 110/581 (19%)
MFS 162..725 CDD:119392 107/564 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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