DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33234 and Ust5r

DIOPT Version :9

Sequence 1:NP_001097483.2 Gene:CG33234 / 2769006 FlyBaseID:FBgn0053234 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_599207.2 Gene:Ust5r / 171398 RGDID:620985 Length:552 Species:Rattus norvegicus


Alignment Length:463 Identity:100/463 - (21%)
Similarity:177/463 - (38%) Gaps:129/463 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 CEMRIHDRRLAWLMAASFAAQMVSCFLW----GELADVYGRRKII-------MITSTVANIVSIL 100
            ||.::       |.:.:..:.|:..|:.    |.|:|.:||:.::       .||.|.....|  
  Rat   139 CESQV-------LNSVTKFSFMIGAFIGGIVNGPLSDRFGRKFVLKCALLQMAITETCVGFAS-- 194

  Fly   101 SACVPEFWGFLFLRSVGGFFIAASVVSLMTYLSEFTKISLRPRVLTIMSFSLGVSMIYVPCLAG- 164
                 .|:.:..||.:.|......:|:....:.|:|.    .:.|.:||       :..|| || 
  Rat   195 -----NFFIYCSLRFLAGMTFEPILVNSNLLMFEWTS----HKFLAMMS-------VIAPC-AGS 242

  Fly   165 ----VLLPLRTEPSSWRILLLCNQVPGIIGIIILVFLPESPKYYLSINNQEKAMQVMEKICRMNK 225
                :|..|..:..:|..|.|...||....:|:..:|.||.::.:..|..:|.::.:.|:..|| 
  Rat   243 FGSMILAGLAFQFQNWHHLQLAMSVPIFFFLILTRWLSESARWLIVTNKPQKGLKELRKVAHMN- 306

  Fly   226 GKKVTLNSLGVESLTQPRLRQ-------PTEKHGSCYETKVLLLNHAKIMWFFFI-IFFSLSGLG 282
            |.|.:.::|.:|.:.....|:       |:.:  ..:.|.:|   ..:|....|: |.|.||..|
  Rat   307 GMKNSGDNLTMEVVRTSMKRELEAAKARPSPR--DLFHTPIL---RKRICAMSFMRILFMLSIFG 366

  Fly   283 FALPIWMLRVRVLTATFTDWDTMCSHLDGIKADS-------P---GRTECHLTYEQMTDPMIHG- 336
            .:|.:..|...::...|.           :.|.|       |   .|....:|  ||....:.| 
  Rat   367 MSLHLQHLSSNIMLLQFV-----------VSASSLLFSVIGPYVFNRMGRRIT--QMVVMTLRGI 418

  Fly   337 CVVLALFVVTSVILTWLSRRWVIIGYICISIIGCV-ALNF---MEHPNLILISFFAIIDPLICSV 397
            |::.|:||         .:...|:....:::.|.. ||:|   ..|.|                 
  Rat   419 CILTAVFV---------PQEMQILRITVVTLAGAFSALSFGVNRLHTN----------------- 457

  Fly   398 RLAGSMLIDLVPTHLRGKVFALISMTGRAGILITSVYV---GYT--LSYICYVTFNIFILVLIVT 457
                    :|:||.||.....:|.|.|.:|..:..:::   .|:  |.:|.|..|:      |:.
  Rat   458 --------ELLPTTLRATAIGVIGMFGNSGFFLAPLFMILASYSPNLPWIFYGGFS------ILN 508

  Fly   458 GCHVYWLP 465
            |..|:.||
  Rat   509 GFTVFLLP 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33234NP_001097483.2 MFS 56..>198 CDD:119392 34/157 (22%)
Ust5rNP_599207.2 MFS_OAT 109..516 CDD:340932 98/461 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346963
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.