DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33234 and sv2c

DIOPT Version :9

Sequence 1:NP_001097483.2 Gene:CG33234 / 2769006 FlyBaseID:FBgn0053234 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_002934873.1 Gene:sv2c / 100490137 XenbaseID:XB-GENE-960877 Length:725 Species:Xenopus tropicalis


Alignment Length:573 Identity:115/573 - (20%)
Similarity:211/573 - (36%) Gaps:158/573 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFTKLGFGKMQ---FIIL---LSCFNLQIWMTNEQLGFGVIIAGASCEMRIHDRRLAWLMAASFA 65
            :..:.|.|:.|   |.:|   |....:::::.      |.::..|..:|.|.|....||.:..:.
 Frog   139 IIQECGHGRFQWTLFFVLGMALMADGVEVFVV------GFVLPSAETDMCIPDSGSGWLGSIVYL 197

  Fly    66 AQMVSCFLWGELADVYGRRKIIMITSTVANIVSILSACVPEFWGFLFLRSVGGFFIAASVVSLMT 130
            ..||..|.||.|||..||::.::|..:|....:.||:.|..:..||..|.:.||.|..::.:..:
 Frog   198 GMMVGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQGYGLFLVCRLLSGFGIGGALPTAFS 262

  Fly   131 YLSEFTKISLRPRVLTIMSFSLGVSMIYVPCLAGVLLP---------LRTEPSSWRILLLCNQVP 186
            |.||......|...|:.:.....:..||...:|..::|         ...:..|||:.::...:|
 Frog   263 YFSEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALP 327

  Fly   187 GIIGIIILVFLPESPKYYLSINNQEKAMQVMEKICRMN-----KGKKVTLNSLGVESLTQPR--- 243
            .:..::.|.|:||||::.|.....::|..::::|...|     :.:||    ..|:.:..|:   
 Frog   328 CVSAVVALTFMPESPRFLLETGKHDEAWMILKQIHDTNMRARGEPEKV----FTVQRIKTPKQID 388

  Fly   244 -----------------LRQPTEKHG------SCYETKVLLLNHAKIMWFFFIIFFSLSGLGFAL 285
                             :|..||.:|      .|:|..| ..|..|:.    |::.:||...:.|
 Frog   389 ELIEIESDTGTWYKRCFVRIRTEFYGIWLTFMRCFEYPV-KDNTIKLT----IVWLTLSFGYYGL 448

  Fly   286 PIWMLRV--------------RVLTATFTDW------------------DTMCS----------- 307
            .:|...|              |...:|..|:                  |...|           
 Frog   449 SVWFSDVIKHLQADEYASRVKRFNGSTIADYKFNYTLENQIHKNAVFINDRFISMKFKSVVFQDS 513

  Fly   308 -----HLDGIKADSPGRTECHL--TYEQMTD------------------PMIHGCVV-------- 339
                 :.:.:.:.:.....|.|  |:...||                  |.| ||.:        
 Frog   514 LFERCYFEDVTSINTYFRNCTLIDTHFVNTDLEKYKFTDSQTINCTFTIPKI-GCQITFDDDYSA 577

  Fly   340 -----------LALF---VVTSVILTWLSRRWVIIGYICISIIGCVALNFMEHPNLILISFFAII 390
                       ||:.   :|:::::..:.|..::.|.:.:|.|.|..|.|....:: ::....:.
 Frog   578 YWIYFVNFLGTLAVLPGNIVSALLMDKIGRLTMLGGSMVLSGISCFLLWFGTSESM-MVGMLCVY 641

  Fly   391 DPLICSV-RLAGSMLIDLVPTHLRGKVFALIS--MTGRA--GILITSVYVGYT 438
            :.|..|. .....:.::|.||..|...|..::  ..|.|  |.||....||.|
 Frog   642 NGLTISAWNSLDVVTVELYPTDKRATGFGFLNALCKGAAVLGNLIFGSLVGIT 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33234NP_001097483.2 MFS 56..>198 CDD:119392 38/150 (25%)
sv2cXP_002934873.1 synapt_SV2 1..725 CDD:130366 115/573 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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