DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33234 and sv2a

DIOPT Version :9

Sequence 1:NP_001097483.2 Gene:CG33234 / 2769006 FlyBaseID:FBgn0053234 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_012825002.1 Gene:sv2a / 100379721 XenbaseID:XB-GENE-968429 Length:729 Species:Xenopus tropicalis


Alignment Length:583 Identity:117/583 - (20%)
Similarity:208/583 - (35%) Gaps:181/583 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFTKLGFGKMQ----FIILLSCF--NLQIWMTNEQLGFGVIIAGASCEMRIHDRRLAWLMAASFA 65
            :..:.|.|:.|    |::.|:..  .::|::.      |.::..|..:|.:.|.....|....:.
 Frog   142 ILQECGHGRFQWTLYFVLGLALMADGVEIFVV------GFVLPSAEKDMCLSDSNKGMLGLIVYL 200

  Fly    66 AQMVSCFLWGELADVYGRRKIIMITSTVANIVSILSACVPEFWGFLFLRSVGGFFIAASVVSLMT 130
            ..||..||||.:||..|||:.::|:.:|.::.:..|:.|..:..|||.|.:.|..|..|:..:.:
 Frog   201 GMMVGAFLWGGMADRIGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFS 265

  Fly   131 YLSEFTKISLRPRVLTIMSFSLGVSMIYVPCLAGVLLP---------LRTEPSSWRILLLCNQVP 186
            |.|||.....|...|:.:.....:..||...:|..::|         ...:..|||:.:|....|
 Frog   266 YFSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFP 330

  Fly   187 GIIGIIILVFLPESPKYYLSINNQEKAMQVMEKICRMN---KGKKVTLNSLGVESLTQPR-LRQP 247
            .:..|..|..:||||:::|.....::|..|::::...|   ||     :...|.|:||.: ::|.
 Frog   331 SVFAIGALTTMPESPRFFLENGKHDEAWMVLKQVHDTNMRAKG-----HPERVFSVTQIKTIKQD 390

  Fly   248 TEKHGSCYETKVL-------LLNHAKIMWFFF----------------IIFFSLSGLGFALPIWM 289
            .|......:|..|       |||.::.:|..|                .::|::|...:.|.:| 
 Frog   391 DELVEIQSDTGALHRRWMIKLLNLSQEVWANFHQCFAPEYRRITLMMMAVWFTMSFSYYGLTVW- 454

  Fly   290 LRVRVLTATFTDWDTMCSHLDGIKADSPGR----------------------------------- 319
                     |.|   |..||..|...|..:                                   
 Frog   455 ---------FPD---MIKHLQNIDYASRTKYFHNESVNNFNFNFTLENQVHRKGEYHNDKFIGLK 507

  Fly   320 -----------TECHLTYEQMT---------------------------------DPMIH---GC 337
                       |:|:  :|.:|                                 ...:|   ||
 Frog   508 LKSVIFEDSLFTDCY--FEDITSSNTFFKNCSFIRTMFYNTDLFDYKFINSKFTNSTFLHSKEGC 570

  Fly   338 -----------------------VVLALFVVTSVILTWLSRRWVIIGYICISIIGCVALNF--ME 377
                                   .||...:|:::::..:.|..::.|...:|.|.|..|.|  .|
 Frog   571 QLDFSDDINNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCISCFFLFFGNSE 635

  Fly   378 HPNLILISFFAIIDPLICSVRLAGSMLIDLVPTHLRGKVF----ALISMTGRAGILITSVYVG 436
            ...:.|:..|..:.  |.|......:.::|.|:..|...|    ||..:....||.|.:.:||
 Frog   636 SAMIALLCLFGGVS--IASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVG 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33234NP_001097483.2 MFS 56..>198 CDD:119392 40/150 (27%)
sv2aXP_012825002.1 synapt_SV2 1..729 CDD:130366 117/583 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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