DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33234 and sv2ba

DIOPT Version :9

Sequence 1:NP_001097483.2 Gene:CG33234 / 2769006 FlyBaseID:FBgn0053234 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001076464.1 Gene:sv2ba / 100009626 ZFINID:ZDB-GENE-070209-134 Length:689 Species:Danio rerio


Alignment Length:622 Identity:113/622 - (18%)
Similarity:205/622 - (32%) Gaps:201/622 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DEVFTKLGFGKMQFIILLSCFNLQIWMTNEQLGFGVIIAGASC------------EMRIHDRRLA 57
            :.:....|.|:.|            |.....||..::..|..|            :|.:.:....
Zfish   100 ESIMEDCGHGRFQ------------WTLFTLLGLALMADGVECFVVSFALPSAEKDMCLSNADKG 152

  Fly    58 WLMAASFAAQMVSCFLWGELADVYGRRKIIMITSTVANIVSILSACVPEFWG-FLFLRSVGGFFI 121
            .|....:...|:...:||.|||..||::.::....:..|.|.|| |..:.:| |:|.|...|..|
Zfish   153 MLGLIVYVGMMIGAVVWGGLADKLGRKQCLLYALAINCIFSFLS-CFAQGYGFFIFFRLCSGIGI 216

  Fly   122 AASVVSLMTYLSEFTKISLRPRVLTIMSFSLGVSMIYVPCLAGVLLP-------LRTEPS--SWR 177
            ..|:..:.||.:||.::..|...|:.:.....:..:|....|..::|       :.||..  |||
Zfish   217 GGSIPVVYTYYAEFLQMDKRGEHLSWLCLFWMLGGLYASFTAWGIIPHYGWGFSMGTEFQFHSWR 281

  Fly   178 ILLLCNQVPGIIGIIILVFLPESPKYYLSINNQEKAMQVMEKICRMNKG---------------- 226
            :.:|...:|.:..:..|||:||||::.|.....::|..::.::...|.|                
Zfish   282 VFVLVCFLPSVAALAGLVFMPESPRFLLESARHDEAWMILRRVHDTNWGAKGEPERVFQVSQIKT 346

  Fly   227 ------------------------------KKVTLNSLGVESLTQPRLRQPTEKHGSCYETKVLL 261
                                          |:|..|.|   ||..|.:|    .||       |.
Zfish   347 PQTQDDEFIEIQSETGTAFQRFMVRQMTLVKQVMKNML---SLAAPDVR----LHG-------LF 397

  Fly   262 LNHAKIMWFFFIIFFSLSGLGFALPIWM------------------------------------- 289
            :   .|:|  |.:.||..|||...|..:                                     
Zfish   398 I---AIVW--FTMAFSYYGLGTWFPDQIKYLQFEEYESNVKIFHRERVERFHFNFTLQNQLHKEG 457

  Fly   290 -------LRVRVLTATFTDWDTMCSHLDGIKA----------------------DSP-------- 317
                   :.:.:....|.|......:.:.||:                      ||.        
Zfish   458 EYVHDRFINIEIRNVKFEDSLFENCYFEDIKSTETFFENCTLKNTVFYNTDLWEDSKFINCNLEN 522

  Fly   318 -----GRTECHLTYEQMTDPMIH------GCVVLALFVVTSVILTWLSRRWVIIGYICISIIGCV 371
                 .:..|||.:::..|.:|:      ...|:...::..:::..:.|..:|.|    |::|..
Zfish   523 TTFLHPKKGCHLNFQEENDILIYLDSFLGSLSVIPGNILAGLLMDKIGRLKIIGG----SMLGSA 583

  Fly   372 ALNFMEHPNLILISFFAIIDPLICSVRLAGS--------MLIDLVPTHLRGKVFALISMTGRAGI 428
            ...|.   .|:..|.:|:: ...|....||:        :.::|.|...|...|.:::.|.:...
Zfish   584 VCTFF---LLLCFSQWAVV-LFQCLFFAAGAAAWNGIEVVTVELYPASKRATAFGVLNGTCKLAA 644

  Fly   429 LITSVYVGYTLSYICYVTFNIFILVLIVTGCHVYWLP 465
            :|:|...|..:.....:...:....|:..|...:.||
Zfish   645 IISSFIFGKFIGITKIIPIILSFSALVCGGLLAFKLP 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33234NP_001097483.2 MFS 56..>198 CDD:119392 40/151 (26%)
sv2baNP_001076464.1 synapt_SV2 36..689 CDD:130366 113/622 (18%)
MFS 116..678 CDD:119392 107/589 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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