DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33233 and Sv2c

DIOPT Version :9

Sequence 1:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_083486.1 Gene:Sv2c / 75209 MGIID:1922459 Length:727 Species:Mus musculus


Alignment Length:581 Identity:124/581 - (21%)
Similarity:215/581 - (37%) Gaps:141/581 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AMDVDTALLTIGYGLGQVIIFMVSFFIYMYSVTESMTAGYLVVLTSCEFDTSPKEKTLLANSLLG 67
            |...:..:...|:|..|..:|.|.....|....|....|:  ||.|.|.|      ..:.||..|
Mouse   135 AQQYELIIQECGHGRFQWALFFVLGMALMADGVEVFVVGF--VLPSAETD------LCIPNSGSG 191

  Fly    68 --------GMVASGLFIGFLADRYGRK--FVIRLALVGALSFSVISALMPDLYSLSVIRIIVGTF 122
                    ||:....|.|.|||:.|||  .:|.:::.|..:|  :|:.:.......|.|::.|..
Mouse   192 WLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMSVNGFFAF--LSSFVQGYGFFLVCRLLSGFG 254

  Fly   123 LSAVASLQVGFLGEFHAIKWRPITVAICSQSQGLALIYCPLVAMAILPN-NFNVDLSSSYNLRVW 186
            :.........:..|..|.:.|...::.......:..||...:|.||:|: .::..:.|:|....|
Mouse   255 IGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSW 319

  Fly   187 RFLMMFFMIPGWLALVGICLVPETPHFLMSVNRPDKALLALKWICRMNRKKWEDVDITLSEEKSS 251
            |..::...:|...::|.:..:||:|.||:.|.:.|:|.:.||.|...|.:.....:...:..|..
Mouse   320 RVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIK 384

  Fly   252 TNDQ----------EGFW--------KT----VWYEYKLLFSKP---HVFKFFICLF-LIFGIFF 290
            |..|          .|.|        :|    :|..:...|:.|   :..|..|..| |.||.: 
Mouse   385 TPKQIDELIEIESDTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRENTIKLTIVWFTLSFGYY- 448

  Fly   291 TSIGLGIWFP-VIRNMD-----------------NSGSN-------------------------- 311
               ||.:||| ||:::.                 |...|                          
Mouse   449 ---GLSVWFPDVIKHLQSDEYALLTRNVQKDKYANFSINFTMENQIHTGMEYENGRFLGVKFKSV 510

  Fly   312 -------RLCDL-----VN---NNPTFINHEADDTN-----GTDSESPKCN-------DEMTNLI 349
                   :.|..     ||   .|.|||:...|:|:     ..|||...|:       .::|  .
Mouse   511 TFKDSVFKSCTFDDVTSVNTYFKNCTFIDTLFDNTDFEPYKFIDSEFQNCSFLHNKTGCQIT--F 573

  Fly   350 DPVY-----YGFTYIGCF------ILASVLVHWMTRKYVIALHILISMILGISLNIMKQPTVVLI 403
            |..|     |...::|..      |::::|:..:.|..::...:::|   |||...:...|...:
Mouse   574 DDDYSAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLS---GISCFFLWFGTSESM 635

  Fly   404 FFVLMMVLPGVLIPLATS---VLVDCLPVNLRGKALCMVRSLARFGGVLGSTMIGLFIRVT 461
            ...::.:..|:.|....|   |.|:..|.:.|......:.:|.:...|||:.:.|..:.:|
Mouse   636 MIGMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSIT 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33233NP_995978.2 MFS_1 22..451 CDD:284993 117/550 (21%)
MFS 23..>208 CDD:119392 45/195 (23%)
MFS 354..>482 CDD:304372 23/117 (20%)
Sv2cNP_083486.1 synapt_SV2 1..727 CDD:130366 124/581 (21%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..128
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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