DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33233 and sv2

DIOPT Version :9

Sequence 1:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster
Sequence 2:XP_009296040.1 Gene:sv2 / 570651 ZFINID:ZDB-GENE-000607-80 Length:522 Species:Danio rerio


Alignment Length:507 Identity:108/507 - (21%)
Similarity:208/507 - (41%) Gaps:71/507 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DTALLTIGYGLGQVIIFMVSFFIYMYSVTESMTAGYLVVLTSCEFDTSPKEKTLLANSLLGGMVA 71
            :.|:...|:||...::.:|..:.......|.:...:|:....|:...|..:..:|..|:..||:.
Zfish    34 EEAVEKAGFGLFHWLLLVVCGWANASDAVEILCVSFLLPTARCDLQLSSADMGILTASIFLGMMV 98

  Fly    72 SGLFIGFLADRYGRKFVIRLALVGALSFSVISALMPDLYSLSVIRIIVGTFLSAVASLQVGFLGE 136
            .|...||||||.||:.|:.::|....:|..:::|.|..:...::|...|..:.....:...:..|
Zfish    99 GGCVWGFLADRRGRRSVLVVSLAVNGTFGAVASLAPTFWLFLLLRFFSGVGVGGSIPVIFSYFSE 163

  Fly   137 FHAIKWRPITVAICSQSQGLALIYCPLVAMAILPNNFNVDLSSSY---NLRVWRFLMMFFMIPGW 198
            |.....|...::..:.......|....||..::|   ...|.:.:   :.:.||..::...||..
Zfish   164 FQPCLRRGAMISALATFWMAGNILAAGVAWLVIP---RTSLHADWGWLDFQSWRLFVVLCSIPSL 225

  Fly   199 -LALVGICLVPETPHFLMSVNRPDKALLALKWICRMNRK-------------KWEDVDITLSEEK 249
             .||:....:||:|.|||...|..:||...:.|.::|.:             :.:|.::......
Zfish   226 SSALIFRLFMPESPKFLMEAGREMEALSVFQKIYKLNNRGATKPFPVSGLMIRPKDDEVKNRPSH 290

  Fly   250 SSTNDQE--GFWKTVWYEYKLLFSKPHVFKFFICLFLIFGIFFTSIGLGIWFP-VIRNMDNSGSN 311
            ||:..|.  ..........|.||.:|...:..:.:.:.|.|.|...||.:||| :.:..::.||.
Zfish   291 SSSRSQRFINQLTQALVPLKQLFVRPLASRSVVLVIIFFCISFGYYGLWMWFPELFKRAEDGGSP 355

  Fly   312 RLCDLVNNNPTFINHEADDTNGTDSESPKCNDEMTNLIDPVYYGFTYIGCFILAS---------- 366
              |             |:.:...::|:.||....|.:         |:..||.|:          
Zfish   356 --C-------------ANMSRAQNAENEKCYPVKTAV---------YMEGFITAASNLPGNIFTI 396

  Fly   367 VLVHWMTRKYVIALHILISMILGISLNIMKQPTVVLIFFVLMMVLPGVLIPLATSVL----VDCL 427
            :|:..:..|.::::.:|:|.:....:.::|..|..||   :..|..||.: ::.:.|    .:..
Zfish   397 LLMDRIGGKILLSVSLLVSGVSVFVIYVVKTKTQSLI---VSCVFSGVSV-ISWNALDVVGTELY 457

  Fly   428 PVNLRGKALCMVRSLARFGGVLGSTMIGLFIRVTCDVTFNIFNLCLAICVVL 479
            |..||..||.:...:.|...::|:.:.|..:..:|.|..      |.:||:|
Zfish   458 PTQLRSSALGVFTGVGRVAAIMGNVVFGQLVDSSCAVPL------LMVCVLL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33233NP_995978.2 MFS_1 22..451 CDD:284993 96/462 (21%)
MFS 23..>208 CDD:119392 39/188 (21%)
MFS 354..>482 CDD:304372 30/140 (21%)
sv2XP_009296040.1 2A0115 33..488 CDD:273327 102/484 (21%)
MFS 50..500 CDD:119392 101/486 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.