DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33233 and Slc22a28

DIOPT Version :9

Sequence 1:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001013842.2 Gene:Slc22a28 / 434674 MGIID:3645714 Length:552 Species:Mus musculus


Alignment Length:468 Identity:107/468 - (22%)
Similarity:167/468 - (35%) Gaps:178/468 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EFDTSPKEKTLLANSLLGGMVASGLFI-----GFLADRYGRKFVIRLALVGALSFSVIS---ALM 106
            |:|...:.:.|  ||:.......||||     |.|:||:||||::..||   |.|::..   |..
Mouse   134 EWDLVCESQAL--NSVAKFSFMIGLFIGAIICGHLSDRFGRKFILTCAL---LQFAITETCVAFA 193

  Fly   107 PDLYSLSVIRIIVGTF---LSAVASLQV------GFLGEFHAIKWRPITVAI---CSQSQGLALI 159
            |..:...::|.:.|..   :|..::|.:      .|||          .||:   |:.|.|    
Mouse   194 PSFFIYCLLRFLAGMSVEPISVNSNLLILEWTNPKFLG----------MVAVLTSCAASIG---- 244

  Fly   160 YCPLVAMAILPNNFNVDLSSSYNLRVWRFLMM--------FFMIPGWLALVGICLVPETPHFLMS 216
            |..|..:|.|             .|:|..|.:        ||::..|::        |:..:|:.
Mouse   245 YMILAGLAFL-------------FRIWHHLQLAMSVPIFFFFILTRWMS--------ESARWLIV 288

  Fly   217 VNRPDKALLALKWICRMNRKKWEDVDITLS-EEKSSTNDQEGFWKTVWYEYKLLFSKPHVFKFFI 280
            .|:|.|.|..|:.:..||..|.....:|:. .|.|..|:.|...:.         |.|.      
Mouse   289 TNKPQKGLKELRKVAHMNGMKNSGNTLTMEVVEASMKNELEAAKRK---------SSPR------ 338

  Fly   281 CLFLIFGIFFTSIGLGIWFPVIRNMDNSGSNRLCDLVNNNPTFINHEADDTNGTDSESPKCNDEM 345
                  .:|.|        |::|       ||:|.|     :|:.                    
Mouse   339 ------DLFHT--------PILR-------NRICVL-----SFMR-------------------- 357

  Fly   346 TNLIDPVYYGFTYIGCFILASVLVHWMTRKYVI-----ALHILISMILGISLNIMKQPTVVLIFF 405
                    |.|| :..|.|:..|.|..|...::     ||.||||:|....||.|.:....|:..
Mouse   358 --------YLFT-VSIFGLSLHLQHLSTNIILLRFLSSALGILISVIGHFVLNHMGRRITQLVLM 413

  Fly   406 VL--MMVLPGVLIP--------------LATSVLVDC---------LPVNLRGKALCMVRSLARF 445
            .|  :.:|..|.:|              .|.|.|..|         ||..||...:.::      
Mouse   414 SLRGIFMLTAVFVPQEMQTLRIIVVTLAAALSSLCMCVSNLHINELLPTTLRATGMGVI------ 472

  Fly   446 GGVLGSTMIGLFI 458
             |:.|::  |||:
Mouse   473 -GMFGNS--GLFL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33233NP_995978.2 MFS_1 22..451 CDD:284993 103/459 (22%)
MFS 23..>208 CDD:119392 45/185 (24%)
MFS 354..>482 CDD:304372 36/135 (27%)
Slc22a28NP_001013842.2 2A0119 11..525 CDD:273328 107/468 (23%)
MFS 151..516 CDD:119392 102/449 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843461
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.