DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33233 and svop-1

DIOPT Version :9

Sequence 1:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_498960.2 Gene:svop-1 / 176250 WormBaseID:WBGene00014021 Length:520 Species:Caenorhabditis elegans


Alignment Length:451 Identity:105/451 - (23%)
Similarity:181/451 - (40%) Gaps:53/451 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VDTALLTIGYGLGQVIIFMVSFFIYMYSVTESMTAGYLVVLTSCEFDTSPKEKTLLANSLLGGMV 70
            ||.|:..:|:|..|:.:.:::...:|....|.|....:....:||:..|..::.|:...:..||:
 Worm    69 VDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMM 133

  Fly    71 ASGLFIGFLADRYGRKFVIRLALVGALSFSVISALMPDLYSLSVIRIIVGTFLSAVASLQVGFLG 135
            .|..|.|.:.||:||:..:..:.:.|....|||.:.|..|.|...|.:.|..:..|.. .|....
 Worm   134 LSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGGVPQ-SVTLYA 197

  Fly   136 EFHAIKWRPITVAICSQSQGLALIYCPLVAMAILPNNFNVDLSSSYNLRVWRFLMMFFMIPGWLA 200
            ||.....|...|.:......:..::..|:|..::         .|:.   ||.||....:|..:.
 Worm   198 EFLPTAQRAKCVVLIESFWAIGAVFEALLAYFVM---------ESFG---WRALMFLSSLPLGIF 250

  Fly   201 LVGICLVPETPHFLMSVNRPDKALLALKWICRMNRKKWEDVDITLSEEKSST---NDQEGFWKTV 262
            .|....:||:..|.|:...|::||..|:...||||     |.:......|||   ::..|     
 Worm   251 AVASFWLPESARFDMASGHPERALETLQAAARMNR-----VQLPTGRLVSSTKAGSESRG----- 305

  Fly   263 WYEYKLLFSKPHVFKFFICLFLIFGI-FFTSIGLGIWFPVIRNMDNSGSNRLCDLVNNNPTFINH 326
              :...|.| |.:.|..|.|:.|:.| .|:..|:.::..|:..     |:..|           |
 Worm   306 --DIANLLS-PDLRKTTILLWCIWAITAFSYYGMVLFTTVLFQ-----SHDEC-----------H 351

  Fly   327 EADDTNGTDSE--SPKCNDEMTNLIDPVYYGFTYIGCFILASVLVHWMTRKYVIALHILISMILG 389
            ....:|||..|  .|....:..:|:......|..:   |:..:::.|..||..:||...:..|..
 Worm   352 GGLFSNGTQMEVCQPLTRSDYFDLLSTTLAEFPGL---IITVLIIEWFGRKKTMALEYAVFAIFT 413

  Fly   390 ISLNI-MKQPTVVLIFFVLMMVLPGVLIPLATSVLVDCLPVNLRGKALCMVRSLARFGGVL 449
            ..|.. :.:.||.::.||....:.|. ...|.....:..|..||...|....::||.|.::
 Worm   414 FLLYFCLDRFTVTVLIFVARAFISGA-FQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIV 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33233NP_995978.2 MFS_1 22..451 CDD:284993 99/435 (23%)
MFS 23..>208 CDD:119392 40/184 (22%)
MFS 354..>482 CDD:304372 22/97 (23%)
svop-1NP_498960.2 2A0119 16..514 CDD:273328 105/451 (23%)
MFS 87..508 CDD:119392 99/433 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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