DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33233 and oct-1

DIOPT Version :10

Sequence 1:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:407 Identity:89/407 - (21%)
Similarity:144/407 - (35%) Gaps:89/407 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LGGMVASGLFIGFLADRYGRK---FVIRLALVGALSFSVISALMPDLYSLSVIRIIVGTFLSAVA 127
            :|..:.:.|| |::||::||:   |||...|:..   ...|:...|:.|..::|...|  |:..|
 Worm   163 VGSFIGNCLF-GYVADKFGRRRSFFVILTVLIVC---GTASSFAKDIESFIILRFFTG--LAFPA 221

  Fly   128 SLQVGFL--GEFHAIKWRPITVAICSQSQGLALIYCPLVAMAILPNNFNVDLSSSYNLRVWRFLM 190
            ..|:.|:  .||.....|..:..:.|...|.|:....:|||.|               |.||.|.
 Worm   222 LFQIPFIICMEFMGNSGRIFSGLMTSLFFGAAMALLGVVAMFI---------------RRWRQLT 271

  Fly   191 MFFMIPGWLALVGICLVPETPHFLMSVNRPDKALLALKWICRMNRKKWEDVDITLSEEKSSTNDQ 255
            .|...|....::....:||:|.:.:||.:...|...||.|.:||.|...|||..:...|:..|..
 Worm   272 FFCNAPFAFYIIYYFFLPESPRWSVSVGKWADAKKQLKKIAKMNGKSNVDVDELVDSMKNHQNAA 336

  Fly   256 EGFWKTVWYEYKLLFSKPHVFKFFICLFLIFGIFFTSIGLGIWFPVIRNMDNSGSNRLCDLVNNN 320
            |.......:....||..|::.:            .|.|...||.     |:....|.|...|:|.
 Worm   337 EEKETKRSHNVTDLFKTPNLRR------------KTLIVTYIWV-----MNAIIYNGLTLNVSNL 384

  Fly   321 PTFINHEADDTNGTDSESPKCNDEMTNLIDPVYYGFTYIGCFILASVLVHW-----MTRKYVIAL 380
            |      .||                      |:.|...|...|....|.|     ..|::.:|.
 Worm   385 P------VDD----------------------YWSFIINGAVELPGYFVVWPLLQCAGRRWTLAA 421

  Fly   381 HILISMILGISLNIMKQPTVVLIF-------------FVLMMVLPGVLIPLATSVLVDCLPVNLR 432
            .:::..|..:|...|......|:.             |.::.:..|.|.|.....:...:...:.
 Worm   422 TMIVCGIGCVSAMFMPDGYPWLVASASFIGKFGVGSGFAVIYIFAGELYPTVVRAIGMGMSSMVA 486

  Fly   433 GKALCMVRSLARFGGVL 449
            |..|.:...:...|.::
 Worm   487 GSGLLLAPHIVNLGKIV 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33233NP_995978.2 2A0119 <49..>295 CDD:273328 60/233 (26%)
oct-1NP_492617.4 MFS_SLC22 128..526 CDD:340875 89/407 (22%)

Return to query results.
Submit another query.