DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33233 and Sv2a

DIOPT Version :9

Sequence 1:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_476558.2 Gene:Sv2a / 117559 RGDID:619715 Length:742 Species:Rattus norvegicus


Alignment Length:604 Identity:119/604 - (19%)
Similarity:217/604 - (35%) Gaps:138/604 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AMDVDTALLTIGYGLGQVIIFMVSFFIYMYSVTESMTAGYLVVLTSCEFD--TSPKEKTLLANSL 65
            |...:|.|...|:|..|..::.|.....|....|....|:  ||.|.|.|  .|...|.:|...:
  Rat   149 AQQYETILRECGHGRFQWTLYFVLGLALMADGVEVFVVGF--VLPSAEKDMCLSDSNKGMLGLIV 211

  Fly    66 LGGMVASGLFIGFLADRYGRKFVIRLALVGALSFSVISALMPDLYSLSVIRIIVGTFLSAVASLQ 130
            ..||:......|.||||.||:..:.::|.....|:..|:.:....:....|::.|..:.....:.
  Rat   212 YLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIV 276

  Fly   131 VGFLGEFHAIKWRPITVAICSQSQGLALIYCPLVAMAILPN-NFNVDLSSSYNLRVWRFLMMFFM 194
            ..:..||.|.:.|...::.......:..:|...:|.||:|: .::..:.|:|....||..::...
  Rat   277 FSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCA 341

  Fly   195 IPGWLALVGICLVPETPHFLMSVNRPDKALLALKWICRMNRKKWEDVDITLSEEKSSTNDQE--- 256
            .|...|:..:...||:|.|.:...:.|:|.:.||.:...|.:.....:...|.....|..||   
  Rat   342 FPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDEL 406

  Fly   257 -------GFWKTVWYEYKLLFSKPHVFKFFICLF---------LIFGIFFTS----IGLGIWFP- 300
                   |.|...| ..:.|.....|:..|:..|         ::.|::||.    .||.:||| 
  Rat   407 IEIQSDTGTWYQRW-GVRALSLGGQVWGNFLSCFSPEYRRITLMMMGVWFTMSFSYYGLTVWFPD 470

  Fly   301 VIRNM------------------------------------------------------------ 305
            :||::                                                            
  Rat   471 MIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSFEDSLFEECY 535

  Fly   306 --DNSGSN---RLCDLVNN------------------NPTFINHEADDTNGTDSESPKCNDEMTN 347
              |.:.||   |.|..:|.                  |.||::::..           |..::|.
  Rat   536 FEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHNKEG-----------CPLDVTG 589

  Fly   348 LIDPVY--YGFTYIGCF------ILASVLVHWMTRKYVIALHILISMILGISLNIMKQPTVVLIF 404
            ..:..|  |..:::|..      |::::|:..:.|..::|...::|.:....|:.....:.::  
  Rat   590 TGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVLSCVSCFFLSFGNSESAMI-- 652

  Fly   405 FVLMMVLPGVLIPL--ATSVL-VDCLPVNLRGKALCMVRSLARFGGVLGSTMIGLFIRVTCDVTF 466
             .|:.:..||.|..  |..|| |:..|.:.|..|...:.:|.:...|||.::...|:.:|.....
  Rat   653 -ALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGITKAAPI 716

  Fly   467 NIFNLCLAICVVLAVFQPK 485
            ...:..||:...||:..|:
  Rat   717 LFASAALALGSSLALKLPE 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33233NP_995978.2 MFS_1 22..451 CDD:284993 105/549 (19%)
MFS 23..>208 CDD:119392 41/187 (22%)
MFS 354..>482 CDD:304372 29/136 (21%)
Sv2aNP_476558.2 synapt_SV2 1..742 CDD:130366 119/604 (20%)
Interaction with SYT1 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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