DRSC/TRiP Functional Genomics Resources

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Protein Alignment zormin and Rp1

DIOPT Version :9

Sequence 1:NP_001261317.1 Gene:zormin / 2769001 FlyBaseID:FBgn0052311 Length:3664 Species:Drosophila melanogaster
Sequence 2:XP_008761780.1 Gene:Rp1 / 681377 RGDID:1596713 Length:2150 Species:Rattus norvegicus


Alignment Length:2298 Identity:412/2298 - (17%)
Similarity:727/2298 - (31%) Gaps:797/2298 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   675 EHKLQFLQATWTGIASTFGELKSRGQRFINLKIVDPYLETKSSAQAVQETLNDFSKRQVDVTSSL 739
            ::|||.  :|..||:|..         |:: |:.....||.|::         ||  .:.:||| 
  Rat     2 DYKLQL--STMPGISSNI---------FLS-KVSSKMSETPSTS---------FS--MIRLTSS- 42

  Fly   740 ENWTTSIAEKREVEYLLEKVMSDNEETVAKSTQVDTQLYPVFTSQSVDSKQLLISTREKLTNVIQ 804
            |....|            :..:....||||.........|.|     ...:::::.|.     .:
  Rat    43 EGQVPS------------RHSNVTHPTVAKRISFYKSGDPQF-----GGVRVVVNPRS-----FK 85

  Fly   805 DIERAQDEIQQRIQTTLGIQTKDQP----SLAKIEQV--------INNLRMLKAKLDGIKYDYRT 857
            ..:...|.:.:::....|::....|    |:.|:|::        .:|.::|...||.       
  Rat    86 TFDALLDNLSRKVPLPFGVRNISTPRGRHSITKLEELEDGESYVCSHNKKVLPVDLDK------- 143

  Fly   858 LVESVIQFLENIVQLRREIDDYFARQQKEPASGADRSIAEHEKFRDQCMDK-------FRS---L 912
                                   ||::..|.. :.|||:.|.|.|......       ||:   |
  Rat   144 -----------------------ARRRPRPWL-SSRSISTHVKLRSATATMPTTAPGLFRAPRRL 184

  Fly   913 I--------TQSELLIDR-------------VRVLEPPGAREIDTD-RILKLLENLRLHFESNSS 955
            :        |:..:|:.|             .:|::.|.|:...|| |.:..|:.:.|     ||
  Rat   185 VVFRNGDPKTRRVVLLSRRITQSFEAFLQYLTQVMQYPVAKLYATDGRKVPSLQAVIL-----SS 244

  Fly   956 ARMSTLERLEKIEQFRSDLEDIDR-----SLDSVSQQLH-------EINNQSVDSLAAAKTTSLA 1008
            ..:....|    |.|:....||.:     .|..:|.::|       |....|..|:...:|.|||
  Rat   245 GAVVAAGR----EPFKPGNYDIQKYLLPVKLPGISHRVHRKGKAKIEKRKMSTHSVPRPQTDSLA 305

  Fly  1009 FEYFERTIEC------SMPRQLKSTRHQRRWGQTAHTIELLEKRIEKFTESTSQQLFITNPESER 1067
               .|:|.:|      :....|....|..:...|..:.:.:||.|            :.|.:...
  Rat   306 ---SEKTYDCFSDFSVAPENYLALETHDSQTLSTYPSEDGVEKSI------------VFNQDGTM 355

  Fly  1068 YVKDELR-KLNE---KWQSFKDQVKQKRKSLNQATDFFEVVEKIDAEYREISYF-------YTSV 1121
            .|..::| |:.|   ||.:          ::|:| |...     |.|..:||.:       .:|:
  Rat   356 TVVMKVRFKIKEETVKWTT----------TVNRA-DLSN-----DDEKSKISSYPGKTEDRSSSL 404

  Fly  1122 SNKVPY-----LRDSVEAGNLVNDIENYVTSREAALRSKL--DSASQ---CAHDMNKVSSLYNDV 1176
            ...||.     :.|:.:.|:|..:....:|.::|...|..  ::||.   ......:|...|...
  Rat   405 KLVVPCSLSEDITDTTQQGSLTEEENTQMTEQQALSSSSAGWENASMEVGIQGSQKQVKHFYRPP 469

  Fly  1177 MNIFQSFIKLKMDINVVQERLKQEQRQKEQRERDARDQAEREK-------AIKEAEAKERLHR-- 1232
            ....:...:.|..|..|....:.|.::|:...|:.|:..|:.|       ..|.:....:|.:  
  Rat   470 TPGPRRMRQKKSVIGTVTVVSETEVQEKQFSYREEREVGEKSKYHMFTHSCSKMSSVSNKLVQIS 534

  Fly  1233 ---EEQSRLENQRQQ----------AAIE-QAQRELA-----ARELALREQAVREEEARLQAIRE 1278
               |.:|.||..::.          .||| .:||.|.     |....:.|.:|.||.....||..
  Rat   535 SDDERESALERTKESGPLKSHAINAGAIEITSQRVLKMCHNNALASTVPENSVVEEGTDDSAISG 599

  Fly  1279 QATREQL--------AREQAAREEEL-------RIQSLRDIARREEEVRLQNIRDEETRIRREEE 1328
            :||.:..        :......:..|       .::::.::......|....:.:|.......|.
  Rat   600 KATIKHFRTCGNANDSFSSTTADTTLTSGNNCPNVRTISEVPSVGSPVLTTGLVNEFAHCGLTEH 664

  Fly  1329 ERIRRENES--RSKREEEARIQREEITRLQTLRDQVDQQRIVTENIRKDI--------QVNSIFT 1383
            ....|:..|  .||:::::                  |||::|...:|.:        :|..|..
  Rat   665 PGNGRQISSPFASKKKKKS------------------QQRMITSKDKKKVIETKGIPNKVGKIHR 711

  Fly  1384 ELRYASPLFTRPLKDAVSREGDRFVFECEVTGTPEPAVEWFKDGISIQTNSDYKTTFDKGICRLV 1448
            ....|..:.   |:|:...:.:..|.|.|:..:|          :.|:::.    .|.||..:. 
  Rat   712 AGTIAQVVL---LQDSGGLDKEGRVREEELDTSP----------MVIESHD----IFPKGNSKF- 758

  Fly  1449 IEETFAADSARFSCRASNLVGTCDTNATLSVRENAAEVQLVPPRILRFLQSGKATEGSSFQFACV 1513
                    |..|.....|.|....|...|:.|::         |.|:....|:..:..:.|    
  Rat   759 --------SKNFHKNKLNTVQNPKTQKLLAKRKS---------RPLKIKSIGELRKQETGQ---- 802

  Fly  1514 VAGVPLPTVQWFKNDKCIDDSPDYVISYNNGEATLKFEEVFLEDD--AVYTCSASNPAGIEHCSA 1576
                         .||....|...:...|..:.:|......||:|  |::. |.|....:.....
  Rat   803 -------------EDKVFLHSESKLCESNLEKQSLLHVFSSLEEDQKALHR-SQSQVETVTENWK 853

  Fly  1577 SLIVEPLEPTELPSFKVPLSNAMARVGQKIKLEAIVG---------------------GIPRPEV 1620
            .:..:.|.| ::....|.:.|...:.|.|:|..|.|.                     |||...|
  Rat   854 GMTKKSLVP-KVNDLHVTVRNQRKQKGVKLKSGATVSEQHIATRADPLASLKKPDLTEGIPHHSV 917

  Fly  1621 -----YWLHNGKPF------------QPRDSKYEYGRVTLIIPQAYPNDAGSYVLSAKNLAGEAY 1668
                 .||.|..|:            |.|.:...|.      ...:|.:.    |...:..|:::
  Rat   918 KSYIQRWLQNINPYPDFEHRKSAPLGQDRSNVVNYN------SNGFPENN----LPTTSSKGKSF 972

  Fly  1669 -------TSCNVIVKGRLPNETSDSEMASDIEPIKPAVHLPLKDVSIFEGKPVRLDCVIVGQPEP 1726
                   .:.|...||....|||.|              |.:||                     
  Rat   973 LMESNKRKTKNANWKGNKNQETSKS--------------LVVKD--------------------- 1002

  Fly  1727 EVIWYHNERPVKESADVQLLFQGDRCSLIIQEVYQEDAGHYKVVAINSAGEASSSCELKVTPLNQ 1791
                 :.|:|.|.|.:.|                  |...|.    :..|....:|.|..|.:| 
  Rat  1003 -----NGEQPNKHSCESQ------------------DESLYD----SYLGPLHDNCTLSQTSIN- 1039

  Fly  1792 AEPATRA--------------------QAERQSL-------------PKD--------------S 1809
             :|.|::                    ..:||:|             |||              :
  Rat  1040 -DPCTKSHLSTEKSRPEVKLVYQEMNFSTKRQTLEVAIQVDTMGENVPKDLLALLLQHLEAFIPN 1103

  Fly  1810 QPKFERLLSDVLADEGEQVVLEVQASGDQPLTAQWFLT-------NKELQLDQRITTQSDSELGV 1867
            ..|.:..:|.:.....|.|......:....|...|.|.       |...|.|...||...||...
  Rat  1104 NQKHQNGISQLPGSLAEVVFPSAIYNSSTNLLLAWLLVLNLKRNMNSFCQSDAPKTTSRSSETAA 1168

  Fly  1868 FKLILNNVSGDDKGVYTVKVTNPAGDAK-CFSHLI--VKSVNAPENRRSSQSSVEII--ERHQCP 1927
            ...:|.:|:          :|..|.|.| ..::|:  .|:.:.|..|....:....|  ..|...
  Rat  1169 LLDVLKHVA----------ITEEADDLKAAVANLVESTKTCSGPSGREQDTAPANCIAASLHSVD 1223

  Fly  1928 EFKELFSDKQGEID-----------EVIKFECIVKGKPTPK----VHWFFNDQPVHGHNFLVSTS 1977
            :.||..|.::..:|           |:...|.:.|...||.    |...:..:.|:..|..:.||
  Rat  1224 KCKENKSTQKSLLDEGYSVRGDCGPELCVLEMVSKSNNTPSEGHTVSMTYPPKGVNNQNDALFTS 1288

  Fly  1978 GERQVLTIQKLTHDA--VGKI-----------SCVAENEAGKATC--------------VAFLNI 2015
            .:...:: |:.||:|  :|:.           :|..::...:|.|              :.|:|.
  Rat  1289 NDSSTMS-QRSTHNASFLGEACLLTDSLCSHKACAQKDNIYEAACLSDETHIPIRDCKTIEFVNS 1352

  Fly  2016 RGS----GLPASSDVQTVS---QEHNTESSRVTIKKQTFTTTSTSQVNSYEGNAPQTEVHHSSAH 2073
            :.:    .|..:.:::||.   ::.|..:..:. |.::..:||:..||......    :..|..|
  Rat  1353 KENKCTDNLELTEEIKTVDKVPKDLNILADSID-KNESDISTSSQNVNKLSSQG----IFLSKTH 1412

  Fly  2074 IDQS-----LKQLGQQRPEIVESHHYQELHKSKEMSSPTVQQKSF-SFIQSSGANGQSAV-AIPD 2131
            :|..     |::.....|:.:.:.. :.:...||.|..:.:.:|. :.:.||..|..|.: :..:
  Rat  1413 LDSDKDYSPLEEFQNCPPKKIVNKK-KSVSSDKEDSRTSEEPRSITNSVTSSERNATSELESFEE 1476

  Fly  2132 SPTR-------------------LRREIAPRFTTPL---SGK-IVDQG---------------AD 2158
            |.::                   :::|...|.:..|   ||: |::||               ..
  Rat  1477 SESQDTGIFNMKVRTEEKAAKESMQKESEARMSLELINISGRNIIEQGRRNTAFLETTGRGQVTP 1541

  Fly  2159 VSMEAIYDGFPSPE---------IKVEKNGGQLFEDAHTRISNKCNRV-----TIELKQVGVGDA 2209
            .|:...||...:.|         ::|:|....:..:::|..|..||:.     |::....|....
  Rat  1542 PSLVFCYDSNKNTEKEMSVGETKMRVKKIVDSMENESYTDSSLNCNKQHRSPGTLDWSDYGSDSE 1606

  Fly  2210 GRYAVTA-----SNTVGQSTSTADLVVKKT----------IFPPVFGRRL--------------- 2244
            .||...|     |:..||.......:|::.          |.||.|...:               
  Rat  1607 SRYPCKALSYEHSDDTGQEREYPRGIVRRAIEKLYGKAEIIKPPFFHGSIHKSQVCPYNPVEVPC 1671

  Fly  2245 ----------------QAQVSKKG-------EKLTMEVEVTGLPEPTVTWLKDDKPLKDAGISEH 2286
                            ..|||:..       |:...||:..|:.:.    ..|....|....|||
  Rat  1672 VKKTHFYESECQSLVSSEQVSRSSLMLQEFQEERQSEVDANGMGDS----FGDSSIEKVTKPSEH 1732

  Fly  2287 -RLLAQGNSYRLIIEKAQTTDSGKYMVRAT--------NAG--GEAKSIADCAILEPSPERLQEV 2340
             |:..:.       ||.:..|:||:::|..        |.|  |.|.:.:               
  Rat  1733 GRVFMEK-------EKGKLIDNGKWLLRENHLWRVSLDNPGMYGNADTTS--------------- 1775

  Fly  2341 VKTIVYETGPVAPASEFKTEVQKQIQNSENQQSYQNSQTEVTSANDLHGLSESKVITEHRCTTEA 2405
            |.|::.:.....|.|.|                     .|:.....:..||.|::       .|.
  Rat  1776 VDTLMDKNSIEVPYSHF---------------------GELAPGPTMAELSSSEI-------EEM 1812

  Fly  2406 TMRLEHKSNYLDLP---------------ELTTRPKTPTTNDTITITTNTATVSMDQPDLTQPTI 2455
            |..||.|.||.:.|               :.|..||....|.......|:.:      :.|...:
  Rat  1813 TQPLEVKCNYFNFPHGSDSEPFGEDFLDAQNTNCPKEKIPNHHKEEKRNSPS------ERTCTPV 1871

  Fly  2456 TNTTTTNTTKVPPPVPPKPCTPVVATTFGQQQQQPPQTLTSTRYEQSEHKSTTSSSSFDYFKKID 2520
            |.|..:...||.|     .|:.|:.|     |..|..::|        |.:.....|.|....:.
  Rat  1872 TQTFASAGNKVHP-----VCSDVIKT-----QPLPGSSIT--------HGALQEGDSLDKLYALC 1918

  Fly  2521 EETIIQRPNPLTFKPLDTVVRQP 2543
            .:..          |:.||:.||
  Rat  1919 GQHC----------PILTVIIQP 1931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zorminNP_001261317.1 SPEC 126..332 CDD:238103
SPEC <504..641 CDD:295325
COG1340 960..1298 CDD:224259 82/419 (20%)
RILP-like <1190..1315 CDD:304877 31/167 (19%)
MAP7 1233..1365 CDD:283355 27/164 (16%)
I-set 1390..1479 CDD:254352 16/88 (18%)
IGc2 1403..1469 CDD:197706 11/65 (17%)
I-set 1491..1580 CDD:254352 15/90 (17%)
IGc2 1504..1570 CDD:197706 12/67 (18%)
I-set 1589..1675 CDD:254352 22/130 (17%)
Ig 1605..1675 CDD:299845 19/114 (17%)
I-set 1702..1786 CDD:254352 12/83 (14%)
Ig 1713..1786 CDD:299845 10/72 (14%)
I-set 1811..1902 CDD:254352 21/100 (21%)
Ig 1828..1892 CDD:143165 14/70 (20%)
I-set 1927..2015 CDD:254352 23/129 (18%)
IGc2 1940..2005 CDD:197706 17/92 (18%)
I-set 2142..2231 CDD:254352 25/126 (20%)
Ig 2158..2231 CDD:299845 18/91 (20%)
I-set 2238..2325 CDD:254352 25/135 (19%)
Ig 2254..2324 CDD:299845 19/80 (24%)
I-set 3566..3655 CDD:254352
Ig 3583..3650 CDD:143165
Rp1XP_008761780.1 DCX 60..135 CDD:176357 11/84 (13%)
DCX 182..257 CDD:176357 17/83 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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