DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zormin and Sestd1

DIOPT Version :9

Sequence 1:NP_001261317.1 Gene:zormin / 2769001 FlyBaseID:FBgn0052311 Length:3664 Species:Drosophila melanogaster
Sequence 2:NP_780674.1 Gene:Sestd1 / 228071 MGIID:1916262 Length:696 Species:Mus musculus


Alignment Length:688 Identity:143/688 - (20%)
Similarity:257/688 - (37%) Gaps:178/688 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 RKIQMEQCLALALLGRELVDLEAALQQARMELNTMYSLGECEHTANEM----LTKYREWKQQALL 384
            ||.|......:.|:.:.:|..|.:|              .|....:|.    :|.:..||:    
Mouse    70 RKSQWNVVKTVVLMLQNVVPAEVSL--------------VCVVKPDEFWDKKVTHFCFWKE---- 116

  Fly   385 LRDR---------ALKITRAKEKVQSAGHFTEEDACARAYAVLSGCTEHLDLVDQREHWLHQSRE 440
             :||         |.|:||..|..|    .||:...:..|       :|:|       ||::...
Mouse   117 -KDRLGFEVILVSANKLTRYIEPCQ----LTEDFGGSLTY-------DHMD-------WLNKRLV 162

  Fly   441 FFAKAEHTVSVLEKLEL------------ELTSVK---LPPHSPES-----YAMFSKVDRDVRNF 485
            |....:.:.|:|::|.|            :..||.   ||...||:     :.:.|::.:  |.|
Mouse   163 FEKFTKESTSLLDELALINNGSDKGNEQEKERSVDLNFLPSVDPETVLQTGHELLSELQQ--RRF 225

  Fly   486 TEEPLRLGYGILDEVGRTQPETQGVKRVLDELENRKVYIQGICANSSEDQQ--KVQRALSEFLNH 548
            ......:.:..:|:....||:   |.::||.|..:....|.:|...|:..|  ::|:.:.:.:| 
Mouse   226 NGSDGGVSWSPMDDELLAQPQ---VMKLLDSLREQYTRYQEVCRQRSKRTQLEEIQQKVMQVVN- 286

  Fly   549 HNELLAWLRASGQHQLQQSVDMGGNLQQAKQFLLQHHELMQD---------LEIKGELINLLL-- 602
                  ||...|..||:....:|.:: :|.|.|.|.||.::.         :|:..::..||.  
Mouse   287 ------WLEGPGSEQLRAQWGIGDSI-RASQALQQKHEEIESQHSEWFAVYVELNQQIAALLNAG 344

  Fly   603 -ESIKVHLESLSPQERYDVDSKAESLHKHWIELKDLVLKRVDYVSLLIDFFELANELSSQLDNLQ 666
             |...|.|:||. |:..||..:..|    .:|.:..:|:..      ::|..:|.:||.|||.|.
Mouse   345 DEEDLVELKSLQ-QQLSDVCYRQAS----QLEFRQNLLQAA------LEFHGVAQDLSQQLDGLL 398

  Fly   667 RQLQQTPDEHKLQFLQATWTGIASTFGELKSRGQRFINLKIVDPYLETKSSAQAVQETLNDFSKR 731
            ..|       .:....|....|..|...|:.:      ||.||..|          :.|.:..:.
Mouse   399 GML-------CVDVAPADGASIQQTLKLLEEK------LKSVDVGL----------QGLREKGQG 440

  Fly   732 QVDVTSSLENWT----TSIAEKREVEYLLEKVMSDNEETVAKSTQVDTQLYPVFTSQSVDSKQLL 792
            .:|..|:..:|.    .:|..|..|:: ::.||.            |.||........||.::|.
Mouse   441 LLDQISNQASWAYGKDVTIENKENVDH-IQGVME------------DMQLRKQRCEDMVDVRRLK 492

  Fly   793 ISTREKLTNVIQDIERAQDEIQQRIQTTL--GIQTKDQPSLAKIEQVINNLRMLKAKLDGIKYDY 855
            :....:|....:|..:|.:.:.:.:...|  .|:..|.....|:  ::...|.. ..:....|||
Mouse   493 MLQMVQLFKCEEDASQAVEWLSELLDALLKTHIRLGDDAQETKV--LLEKHRKF-VDVAQSTYDY 554

  Fly   856 -RTLVESVIQFLENIVQLRREIDD----------YFARQQKEPASGADRSIAEH---EKFRDQC- 905
             |.|:::.:...:::....|...|          .|....:|.....:.:||.|   ||....| 
Mouse   555 GRQLLQATVVLCQSLRCTSRSSGDTLPRLNRVWKQFTVASEERVHRLEMAIAFHSNAEKILQDCP 619

  Fly   906 --------MDKFRSLITQSELLIDR--VRVLEPPGARE 933
                    .::|..:....:.|:||  :.|:.|.|..:
Mouse   620 EEPEAMNDEEQFEEIEAIGKSLLDRLTIPVVYPDGTEQ 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zorminNP_001261317.1 SPEC 126..332 CDD:238103 3/7 (43%)
SPEC <504..641 CDD:295325 38/150 (25%)
COG1340 960..1298 CDD:224259
RILP-like <1190..1315 CDD:304877
MAP7 1233..1365 CDD:283355
I-set 1390..1479 CDD:254352
IGc2 1403..1469 CDD:197706
I-set 1491..1580 CDD:254352
IGc2 1504..1570 CDD:197706
I-set 1589..1675 CDD:254352
Ig 1605..1675 CDD:299845
I-set 1702..1786 CDD:254352
Ig 1713..1786 CDD:299845
I-set 1811..1902 CDD:254352
Ig 1828..1892 CDD:143165
I-set 1927..2015 CDD:254352
IGc2 1940..2005 CDD:197706
I-set 2142..2231 CDD:254352
Ig 2158..2231 CDD:299845
I-set 2238..2325 CDD:254352
Ig 2254..2324 CDD:299845
I-set 3566..3655 CDD:254352
Ig 3583..3650 CDD:143165
Sestd1NP_780674.1 CRAL_TRIO_2 33..153 CDD:404584 23/112 (21%)
SPEC 273..478 CDD:413338 58/259 (22%)
Spectrin 1 275..378 27/115 (23%)
Spectrin 2 381..494 33/148 (22%)
SPEC 413..605 CDD:413338 40/223 (18%)
Spectrin 3 500..602 16/104 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4240
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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