DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zormin and Palld

DIOPT Version :9

Sequence 1:NP_001261317.1 Gene:zormin / 2769001 FlyBaseID:FBgn0052311 Length:3664 Species:Drosophila melanogaster
Sequence 2:XP_038950842.1 Gene:Palld / 100360205 RGDID:2322545 Length:1409 Species:Rattus norvegicus


Alignment Length:1510 Identity:303/1510 - (20%)
Similarity:462/1510 - (30%) Gaps:577/1510 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1197 LKQEQRQKE-QRERDARDQAEREKAIKEAEAKERLHREEQSRLE--NQRQQAAIEQAQRELAARE 1258
            |.||:..|. ...|.|.|.:|.|....|.|..:...:...|..|  :..::.:.||...| ..|:
  Rat    34 LSQEEINKSLDLARRAIDNSETEDFDSEKEISQIFSKSPTSLCETPSYEEKKSGEQTSSE-GPRD 97

  Fly  1259 LALREQAVREEEARLQAIREQATREQLAREQAAREE---------ELRIQSLRDIARREEEV--- 1311
                     ...|.:|.:.|||  |::....|::.:         ...|:|||...:|..:|   
  Rat    98 ---------NRRASVQPLAEQA--ERITSPAASKRKPGVSPLLASPSYIRSLRKAEKRGAKVPNP 151

  Fly  1312 --------------------RLQNIRDEETRIRRE-EEERIRRENESRSKREEEARIQREEITRL 1355
                                :..:..:|.|.|.|| .:.|.|..|...|..:......:.:.:.|
  Rat   152 SAKPKAAQQSKTGPQSQLCDKAASFIEELTSIFREAAKPRNRSPNGESSSPDSGYLSPKNQPSTL 216

  Fly  1356 QT-------LRDQVDQQRIVTENIRKDIQVNSIFTELRY-------------------------- 1387
            .:       ..||:||       :..|.:|......|.|                          
  Rat   217 MSASASQSPTADQLDQ-------LEMDAEVKQPQGSLCYQAHKAPEETLPHTHIPHPQPQKARHL 274

  Fly  1388 --ASPLFTRPLKDAVSREGDRFVFECEVTGTPEPAVEWFKDGISIQTNSDYKTTFDKG-ICRLVI 1449
              ::|.|.:.|:.....||.|...||.|||.|.|.|.||.:|..:....|.:...:.| :..|||
  Rat   275 PSSAPRFIQKLRSQEVAEGSRVYLECRVTGNPAPRVRWFCEGKELYNCPDIQIHCEGGELHTLVI 339

  Fly  1450 EETFAADSARFSCRASNLVGTCDTNA---------TLSVRENA---AEVQLVP------------ 1490
            .|.|..|:.|::|.|:|..|:..|:|         |.|..||:   ::|..:|            
  Rat   340 AEAFEDDTGRYTCLATNPSGSDSTSAEVFIEGASSTDSESENSSFGSKVGAMPQAQKKTTSVSLT 404

  Fly  1491 --------------------------------------------PRILRFLQSGKATEGSSFQFA 1511
                                                        |...:.||:..|:||......
  Rat   405 IGSSSPKTGVTTAVIQPLSVPVQQVHSATSYLCRPDGTTMGCLLPVFTKELQNTAASEGQVVVLE 469

  Fly  1512 CVVAGVPLPTVQWFKNDKCIDDSPDYVISYNNGEATLKFEEV--------FLEDDAVYTCSASN- 1567
            |.|.|.|...||||:....|.||||:.|......:|.:.||:        |.||..::||||.| 
  Rat   470 CRVRGAPPLQVQWFRQGSEIQDSPDFRILQKKPRSTAEPEEICTLVIAESFPEDAGIFTCSARND 534

  Fly  1568 -------------PAGIEHCSASLIVEP--------------LE----------PTELPSFKVP- 1594
                         .|..|:||...:.||              ||          |:|:.....| 
  Rat   535 YGSVTSTAQLVVTSANTENCSYDSMGEPNSDHFQHFPPPPPILETGSYELASQKPSEIQQVNTPN 599

  Fly  1595 LSNAMARVGQKI-KLEAIVGGI-PRPEVYWLHNGK------------------------------ 1627
            |...||.:..:. ..|....|: |...|..|.|||                              
  Rat   600 LGFNMAALQMQFNSAERETNGVHPSHGVNGLINGKAYGNKSPPTPAALLSPTKEPPPLLAKPKLD 664

  Fly  1628 ------------------------------------------PFQPRDSKYEYGRVTLIIPQAYP 1650
                                                      ||.|.             |.|:|
  Rat   665 PLKLQQLQNQVRLEQEACAWPPAPPGVPCNSSSSGSSAPPSPPFPPP-------------PPAFP 716

  Fly  1651 ------------------------NDAGSY-------VLSAKNLAGEAYTSCNVIVKGRLPNETS 1684
                                    ..:||:       .::|:|| |.|         ..||..||
  Rat   717 ELAACASPVPSEPMSALASRSTAMQSSGSFNYARPKQFIAAQNL-GPA---------SGLPTPTS 771

  Fly  1685 DSEMASDIEPIKPAVHLPLKDVSIFEGKPVRLDCVIVGQP--EPEVIW----------------- 1730
            ....:|...|:.|... |      |...|        |.|  |||.:|                 
  Rat   772 SPSSSSLPSPLSPTPR-P------FGRAP--------GPPFVEPEAMWGPSSPSPPPPPPPVFSP 821

  Fly  1731 -----------------------YHNERPVKESADVQLLFQGDRCSLIIQEVYQEDAGHYKVVAI 1772
                                   .|...|.:.|       .|...:..:..:.....   ..||:
  Rat   822 STAFPVPDVFPLPPPPPPLPSSTSHCASPARFS-------PGQTPAAFLSALLPSQP---PPVAV 876

  Fly  1773 NSAGEASSSCELKVTPLNQAEPATRA---------QAERQSLPKDSQPKFERLLSDVLADEGEQV 1828
            |:.|....     |||....:.|:|.         |..:.::.:|.:.|. |...|:|       
  Rat   877 NALGLPKG-----VTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKL-RFKEDLL------- 928

  Fly  1829 VLEVQASGDQPLTAQWFLTNKELQLDQR--ITTQSDSELGVFKLILNNVSGDDKGVYTVKVTNPA 1891
                 .:|...||.:..:..:.|..|..  ...|...|         ..:..|.|.....|..|.
  Rat   929 -----NNGQPRLTYEERMARRLLGADSANVFNIQEPEE---------TAANQDAGAPRASVGGPL 979

  Fly  1892 GDAK------CFSHLIVKSVNAPENRRSSQSSVEI------IERHQCPEFKELFSDKQGEIDE-- 1942
            ...|      |...||.:.....|.....::..|:      :|....|.|:  ...|..:|.|  
  Rat   980 DGQKEYKVSSCEQRLISEIEYRLERSPVEETGDEVQEAEVPVENAAAPFFE--MKLKHYKIFEGM 1042

  Fly  1943 VIKFECIVKGKPTPKVHWFFNDQPVHGHNFLVSTSGERQVLTIQK------------LTHDAVGK 1995
            .:.|.|.|.|.|.||::||.:.:.:         |.:....|||:            .|.|..|.
  Rat  1043 PVTFTCRVAGSPKPKIYWFKDGKQI---------SPKSDHYTIQRDVDGTCSLHTTASTLDDDGN 1098

  Fly  1996 ISCVAENEAGKATCVAFLNIRGSGLPASSDVQTVSQEHNTESSRVTIKKQTFTTTSTSQVNSYEG 2060
            .:.:|.|..|:.:|...|.           ||.|:|                           .|
  Rat  1099 YTIMAANTQGRVSCTGRLM-----------VQAVNQ---------------------------RG 1125

  Fly  2061 NAPQTEVHHSSAHIDQSLKQLGQQRPEIVESHHYQELHKSKEMSSPTVQQKSF--SFIQSSGANG 2123
            .:|::...|..|           :||.       .....|.:.:.| :|::.|  .|:|      
  Rat  1126 RSPRSPPGHPHA-----------RRPR-------SRSRDSGDENEP-IQERFFRPHFLQ------ 1165

  Fly  2124 QSAVAIPDSPTRLRREIAPRFTTPLSGKIVDQGADVSMEAIYDGFPSPEIKVEKNGGQLFED-AH 2187
                             ||...|...||:......||      |.|:|::..:.:|..:..| ||
  Rat  1166 -----------------APGDLTVQEGKLCRMDCKVS------GLPTPDLSWQLDGKPIRPDSAH 1207

  Fly  2188 TRISNKCNRVTIELKQVGVGDAGRYAVTASNTVGQSTSTADLVV--KKTIFPPVFGRRLQAQVSK 2250
            ..:..:....::.::.|...|||.|...|:|..||::...:|||  |:....|||..:||.....
  Rat  1208 KMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFNLELVVAAKEAHKAPVFIEKLQNTGVA 1272

  Fly  2251 KGEKLTMEVEVTGLPEPTVTWLKDDKPLKDA--GISEHRLLAQGNSY-RLIIEKAQTTDSGKYMV 2312
            .|..:.:|..|:|:|.|.:.|.|:::.|..:  .:|.|:   ..:.| .|:|:.|...|:|.|.|
  Rat  1273 DGYPVRLECRVSGVPPPQIFWKKENESLTHSTDRVSMHQ---DNHGYICLLIQGATKEDAGWYTV 1334

  Fly  2313 RATNAGGEAKSIADC 2327
            .|.|..|    |..|
  Rat  1335 SAKNEAG----IVSC 1345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zorminNP_001261317.1 SPEC 126..332 CDD:238103
SPEC <504..641 CDD:295325
COG1340 960..1298 CDD:224259 24/112 (21%)
RILP-like <1190..1315 CDD:304877 30/152 (20%)
MAP7 1233..1365 CDD:283355 32/173 (18%)
I-set 1390..1479 CDD:254352 33/98 (34%)
IGc2 1403..1469 CDD:197706 26/66 (39%)
I-set 1491..1580 CDD:254352 35/110 (32%)
IGc2 1504..1570 CDD:197706 27/87 (31%)
I-set 1589..1675 CDD:254352 25/191 (13%)
Ig 1605..1675 CDD:299845 21/174 (12%)
I-set 1702..1786 CDD:254352 17/125 (14%)
Ig 1713..1786 CDD:299845 15/114 (13%)
I-set 1811..1902 CDD:254352 18/98 (18%)
Ig 1828..1892 CDD:143165 11/65 (17%)
I-set 1927..2015 CDD:254352 26/101 (26%)
IGc2 1940..2005 CDD:197706 20/78 (26%)
I-set 2142..2231 CDD:254352 23/89 (26%)
Ig 2158..2231 CDD:299845 19/73 (26%)
I-set 2238..2325 CDD:254352 27/89 (30%)
Ig 2254..2324 CDD:299845 21/72 (29%)
I-set 3566..3655 CDD:254352
Ig 3583..3650 CDD:143165
PalldXP_038950842.1 IgI_2_Titin_Z1z2-like 278..369 CDD:409564 32/90 (36%)
Ig strand B 296..300 CDD:409564 0/3 (0%)
Ig strand C 309..313 CDD:409564 1/3 (33%)
Ig strand E 335..339 CDD:409564 1/3 (33%)
Ig strand F 349..354 CDD:409564 2/4 (50%)
Ig strand G 362..365 CDD:409564 1/2 (50%)
I-set 449..546 CDD:400151 31/96 (32%)
Ig strand A' 454..458 CDD:409353 2/3 (67%)
Ig strand B 466..474 CDD:409353 2/7 (29%)
Ig strand C 479..484 CDD:409353 3/4 (75%)
Ig strand C' 487..489 CDD:409353 0/1 (0%)
Ig strand D 495..500 CDD:409353 1/4 (25%)
Ig strand E 511..516 CDD:409353 0/4 (0%)
Ig strand F 525..533 CDD:409353 4/7 (57%)
Ig strand G 536..546 CDD:409353 0/9 (0%)
IgI_1_Palladin_C 1027..1118 CDD:409474 26/112 (23%)
Ig strand B 1044..1048 CDD:409474 1/3 (33%)
Ig strand C 1057..1061 CDD:409474 1/3 (33%)
Ig strand E 1084..1088 CDD:409474 0/3 (0%)
Ig strand F 1098..1103 CDD:409474 0/4 (0%)
Ig strand G 1111..1114 CDD:409474 1/2 (50%)
Ig 1161..1251 CDD:416386 26/118 (22%)
Ig strand A 1161..1164 CDD:409353 0/2 (0%)
Ig strand A' 1167..1172 CDD:409353 1/4 (25%)
Ig strand B 1177..1184 CDD:409353 0/6 (0%)
Ig strand C 1191..1197 CDD:409353 0/5 (0%)
Ig strand C' 1198..1201 CDD:409353 1/2 (50%)
Ig strand D 1207..1213 CDD:409353 1/5 (20%)
Ig strand E 1216..1226 CDD:409353 1/9 (11%)
Ig strand F 1230..1238 CDD:409353 3/7 (43%)
Ig strand G 1240..1251 CDD:409353 3/10 (30%)
IgI_Myotilin_C 1260..1351 CDD:409473 29/93 (31%)
Ig strand B 1277..1281 CDD:409473 0/3 (0%)
Ig strand C 1290..1294 CDD:409473 0/3 (0%)
Ig strand E 1317..1321 CDD:409473 1/3 (33%)
Ig strand F 1331..1336 CDD:409473 2/4 (50%)
Ig strand G 1344..1347 CDD:409473 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8577
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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