DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33230 and RKM4

DIOPT Version :9

Sequence 1:NP_995955.1 Gene:CG33230 / 2768998 FlyBaseID:FBgn0053230 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_010543.1 Gene:RKM4 / 851844 SGDID:S000002665 Length:494 Species:Saccharomyces cerevisiae


Alignment Length:369 Identity:91/369 - (24%)
Similarity:149/369 - (40%) Gaps:75/369 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EQTGRGLCSKQKTFSPEDELIRLPIGCLISIATLESDGPFKSLFDEELFDKDSRISFQALIACYI 110
            :..||.:.:.|| ...::.|.::|...::|:.|.:....:.||.|:.|.:..   |::.||.|.:
Yeast    35 DNQGRAVVATQK-IKKDETLFKIPRSSVLSVTTSQLIKDYPSLKDKFLNETG---SWEGLIICIL 95

  Fly   111 LYHKHLQECTLGTHSSTYAAYLD--TLPRCYSTPYFCSIPELQCLPESLLERTVAQNRQIRGYFE 173
            ...:.|||      .|.:|.|..  ..|...:...|....|||.|..||:...:.:......:..
Yeast    96 YEMEVLQE------RSRWAPYFKVWNKPSDMNALIFWDDNELQLLKPSLVLERIGKKEAKEMHER 154

  Fly   174 IIKNIVHKCDCCGKSYGQE---IWTLADF-KWAYF----------------SVNTRSVHLSSRFL 218
            |||:|        |..|.|   :.|..:| .:||.                |||......:|...
Yeast   155 IIKSI--------KQIGGEFSRVATSFEFDNFAYIASIILSYSFDLEMQDSSVNENEEEETSEEE 211

  Fly   219 KKQSNYFQPLISGDTNLALAPFLDLFNHSDQVEITAGIEGPDYVLT-----LKSLPFSETKPYDQ 278
            .:...|.:.:|         |..|:.| :|..:..|.       ||     ||.:...:.:..:|
Yeast   212 LENERYLKSMI---------PLADMLN-ADTSKCNAN-------LTYDSNCLKMVALRDIEKNEQ 259

  Fly   279 LFISYGALPNFKLLTEYGF--WLRENKHDYFEVSLLDIEHMIKQNKELSTQTFHRNIFKFIREHN 341
            ::..||..||.:||..||:  | ..:|:|:.||.|.:|...:|:..|.:|:...|.|  .|..:|
Yeast   260 VYNIYGEHPNSELLRRYGYVEW-DGSKYDFGEVLLENIVEALKETFETNTEFLDRCI--DILRNN 321

  Fly   342 LNDQMFVHIDD------GCSHNLRVVLHLIFKQQAYFPNILNQI 379
            .|.|.|:..::      .|.:|..::..||...|..  .||.||
Yeast   322 ANIQEFLEGEEIVLDSYDCYNNGELLPQLILLVQIL--TILCQI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33230NP_995955.1 T6SS_VipB <229..>314 CDD:301628 25/91 (27%)
RKM4NP_010543.1 SET_SETD6 21..281 CDD:380955 65/280 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 52 1.000 Inparanoid score I1825
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13271
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1321
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.090

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