DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33230 and RKM2

DIOPT Version :9

Sequence 1:NP_995955.1 Gene:CG33230 / 2768998 FlyBaseID:FBgn0053230 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_010484.1 Gene:RKM2 / 851779 SGDID:S000002606 Length:479 Species:Saccharomyces cerevisiae


Alignment Length:528 Identity:120/528 - (22%)
Similarity:201/528 - (38%) Gaps:160/528 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KKSDE---------------------NSGSL--HDLYVHLHSVGWQN-HT---HLSAQYYEQTGR 50
            ||||:                     :.||:  :|:.|.:.|....| ||   |:|....|....
Yeast    13 KKSDKFYIAPNISICESPETGRGIVLSHGSIRKNDIIVSVPSSKQLNFHTILYHISKFNKELNIP 77

  Fly    51 GLCSKQKTFSPEDELIRLPIGCLISIATLESD---------GPFKSLFDEELFDKDSRISFQALI 106
            |:...:|..:.||.:|             |::         |.:..|..|.|.   |..||| |:
Yeast    78 GITIDRKPINYEDNII-------------EAENKAWADPRYGLYSELSKEFLL---SLSSFQ-LV 125

  Fly   107 ACYILYHKHLQECTLGTHSSTYA---AYLDTLPRCYSTPYFCSIPELQCLP-----------ESL 157
            :.|||....|  ....||:..|:   .:.|..|         |:.||:.:|           .||
Yeast   126 SFYILVENFL--LPKWTHNEIYSDWKPFFDVWP---------SMEELRSIPAIWNCDPNSRYHSL 179

  Fly   158 LERTVAQNRQ--------IRGYFEIIKNIVHKCD------CCGKS----YGQEIWTLADFKWAYF 204
            :|...|.:|:        :|..:|.|..:|.|.:      .|.|:    ...|:::|  |...||
Yeast   180 IEYLPAASRKHMARISGLVREDWETISEVVLKWNEIYGSLSCTKNSDKFTSDELFSL--FVHVYF 242

  Fly   205 SVNTRSVHLSSRFLKKQSNYFQPLISGD--TNLALAPFLDLFNH---SD-----QVEITAGIEGP 259
            .:|:|.::...           ||...|  :|..|.|::|..||   ||     |:......||.
Yeast   243 IINSRCLYAKI-----------PLKIEDSPSNFTLVPYVDFMNHICESDLHCYPQLSPQLRSEGE 296

  Fly   260 DYV----LTLKSLPFSETKPYDQLFISYGALPNFKLLTEYGFWLRENKHDYFEVSLLDIEHMIKQ 320
            :.:    .|::..........::||::|||..|..||.||||.:..||.:|.::|...||.:...
Yeast   297 NIIGIGQFTIRCGDHLYDNINEELFLNYGAHSNDFLLNEYGFVVDGNKWNYLDISDEIIELIDDD 361

  Fly   321 NKELSTQTFHRNIFKFIREHN------LND-----QMFVHIDDGCSHNLRVVLHLI--FKQQAYF 372
            .||:.|         |:.||:      :|:     ::||.::...:.:.|.|...|  :..:.||
Yeast   362 KKEVKT---------FLLEHDYWGDYTINETDISYRIFVALNYYVTRDERRVRKFIEGYISEDYF 417

  Fly   373 ----PNILNQIAFGDAEQFQDVQPELSYLVEYKIKEYEIFGGELDKLPKLTESGAVARSYLQECI 433
                .::|.::......::.....||:..|           ..|:....|.....:.:.|::...
Yeast   418 KPKISSVLKELLVSLTAKYTKTLSELTEKV-----------SNLENNLCLQNLITIYKGYIKILT 471

  Fly   434 RYLVDFQS 441
            ::|.|.||
Yeast   472 QHLQDLQS 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33230NP_995955.1 T6SS_VipB <229..>314 CDD:301628 29/98 (30%)
RKM2NP_010484.1 SET_SETD4 20..340 CDD:380954 85/360 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I2979
eggNOG 1 0.900 - - E1_KOG1337
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005857
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105100
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1321
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.740

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