DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33230 and AT1G24610

DIOPT Version :10

Sequence 1:NP_995955.1 Gene:CG33230 / 2768998 FlyBaseID:FBgn0053230 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_564222.1 Gene:AT1G24610 / 839075 AraportID:AT1G24610 Length:476 Species:Arabidopsis thaliana


Alignment Length:315 Identity:85/315 - (26%)
Similarity:121/315 - (38%) Gaps:64/315 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YVHLHSVGWQNHTHLSAQYYEQTGRGLCSKQKTFSPEDELIRLPIGCLISIATLESDGPFKSLFD 90
            :|| |:|.....|        |.|.||.|.:: .||..:||.||....:...:.:|.....||..
plant    46 FVH-HAVKLSQET--------QFGIGLISTEQ-ISPGTDLISLPPHVPLRFESDDSSSSSSSLLS 100

  Fly    91 -------EELFDKDSRISFQALIACYILYHKHLQECTLGTHSSTYAAYLDTLPRCYSTPYFC--- 145
                   |||:             ...|..:.|||  .....|.:..|:..||..|:.|.|.   
plant   101 ALARRVPEELW-------------AMKLGLRLLQE--RANADSFWWPYISNLPETYTVPIFFPGE 150

  Fly   146 SIPELQCLPESLLERTVAQNR-------QIRGYFEIIKNIVHKCDCCGKSYGQEIWTLADFKWAY 203
            .|..||..|  ||.:...:.|       :||...|.:|...|...      ||:: ..:...|..
plant   151 DIKNLQYAP--LLHQVNKRCRFLLEFEQEIRRTLEDVKASDHPFS------GQDV-NASALGWTM 206

  Fly   204 FSVNTRSVHLSSRFLKKQSNYFQPLISGDTNLALAPFLDLFNHS--DQVEITAGIEGPDYVLTLK 266
            .:|:||:..|...  ||    .|...|.|..:.| |.:|:.|||  ....|.....|.|....:|
plant   207 SAVSTRAFRLHGN--KK----LQGGSSDDVPMML-PLIDMCNHSFKPNARIIQEQNGADSNTLVK 264

  Fly   267 SLPFSETKPYDQLFISYGALPNFKLLTEYGFWLRENKHDYFEV----SLLDIEHM 317
            .:..:|.|..|.|.::||.|.|...|.:|||.:..|.:|..|:    .|:|...|
plant   265 VVAETEVKENDPLLLNYGCLSNDFFLLDYGFVIESNPYDTIELKYDEQLMDAASM 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33230NP_995955.1 SET_SETD4 36..299 CDD:380954 75/281 (27%)
AT1G24610NP_564222.1 SET_LSMT 50..296 CDD:380925 75/285 (26%)
Rubis-subs-bind 326..453 CDD:462737
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.