DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33230 and setd4

DIOPT Version :10

Sequence 1:NP_995955.1 Gene:CG33230 / 2768998 FlyBaseID:FBgn0053230 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001039027.1 Gene:setd4 / 564058 ZFINID:ZDB-GENE-050808-2 Length:440 Species:Danio rerio


Alignment Length:455 Identity:117/455 - (25%)
Similarity:199/455 - (43%) Gaps:62/455 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRTQRRRHQRAKKSDENSGSLHDLYVHLHSV------GWQNHTHLSAQ-----YYEQTGRGLCS 54
            |.:|:.|..:||:|..........:....|..      .|.|....::|     .:..|||||.:
Zfish     1 MNKTRCRAGRRARKKRRKKHEDFSIVTLSHEAQFVLLRRWLNERGFTSQSLIPVNFHDTGRGLMA 65

  Fly    55 KQKTFSPEDELIRLPIGCLISIATLESDGPFKSLFDEELFDKDSRISFQALIACYILYHKHLQEC 119
            .| |...::.:|.||..||::.:|:     .||...:.:......||....:.|:::..:|..| 
Zfish    66 TQ-TIKAKNSVISLPEECLLTTSTV-----LKSYMADYIKRWHPPISPLLALCCFLISERHHGE- 123

  Fly   120 TLGTHSSTYAAYLDTLPRCYSTPYFCSIPELQCLPESLLERTVAQNRQIRGYFEIIKNIVHKCDC 184
                 :|.:..|:|.||:.|:.|.:.....::.||.||.::...|..|.:..|...:...|....
Zfish   124 -----ASEWNPYIDILPKTYTCPLYFPDNVIELLPRSLQKKATQQKEQFQELFSSSQTFFHSLQP 183

  Fly   185 CGKSYGQEIWTLADFKWAYFSVNTRSV---HLSSRFLKKQSNYFQPLISGDTNLALAPFLDLFNH 246
            ......:|:::....:||:.|||||:|   |..|::|.::.:.:          ||||:|||.||
Zfish   184 LFNQPTEELFSQDALRWAWCSVNTRTVYMEHDQSKYLSREKDVY----------ALAPYLDLLNH 238

  Fly   247 SDQVEITAGIEGPDYVLTLKSLPFSETKPYDQLFISYGALPNFKLLTEYGFWLRENKHD--YFEV 309
            ...|::.||.........::|:  :..|.:.|.||:||...|.:||.||||....|.|.  |.::
Zfish   239 CPNVQVEAGFNKETRCYEIRSV--NGCKKFQQAFINYGPHDNHRLLLEYGFVAPCNPHSVVYVDL 301

  Fly   310 SLLDIEHMIKQNKELSTQTFHRNIFKFIREHNLNDQMFVHIDDGCSHNLRVVLHLI-FKQQAY-- 371
            ..|.: .:.:::|:|..:..:.....|:|  ||...|     ||.|..|...|.|: .|.|.|  
Zfish   302 ETLKV-GLDEKDKQLKEKLLYLKDNDFLR--NLTFGM-----DGPSWRLMTALRLLSLKPQQYTR 358

  Fly   372 FPNILNQIAFGDAEQFQDVQPEL---SYLVEYKIKEYEIFGGELDKLPKLTESGAVARSYLQECI 433
            :.::|...|.....:...::..|   :.|.|..:|       .|::|.:|.| ||......|.|:
Zfish   359 WKSVLLGAAVSQDREDWCIESALKLCNNLTEDNVK-------ALERLAQLKE-GANQSGLEQLCV 415

  Fly   434  433
            Zfish   416  415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33230NP_995955.1 SET_SETD4 36..299 CDD:380954 75/270 (28%)
setd4NP_001039027.1 SET_SETD4 48..288 CDD:380954 73/263 (28%)
Rubis-subs-bind 309..427 CDD:462737 30/122 (25%)

Return to query results.
Submit another query.