DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33230 and Setd3

DIOPT Version :9

Sequence 1:NP_995955.1 Gene:CG33230 / 2768998 FlyBaseID:FBgn0053230 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001351195.1 Gene:Setd3 / 52690 MGIID:1289184 Length:601 Species:Mus musculus


Alignment Length:479 Identity:102/479 - (21%)
Similarity:177/479 - (36%) Gaps:127/479 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GSLHDLYVHLHSVGWQNHTHLSAQYYE-----QTGRGLCSKQKTFSPEDELIRLPIGCLISIATL 79
            |...|.:..|  :.|.:....|.:.:|     :.|.|| ...:....|:..:.:|...|:::.:.
Mouse    80 GKREDYFPDL--MKWASENGASVEGFEMVNFKEEGFGL-RATRDIKAEELFLWVPRKLLMTVESA 141

  Fly    80 ESD--GPFKSLFDEELFDKDSRISFQAL----IACYILYHKHLQECTLGTHSSTYAAYLDTLPRC 138
            ::.  ||        |:.:| || .||:    :|.::|       |...:.:|.:..|:.|||..
Mouse   142 KNSVLGP--------LYSQD-RI-LQAMGNIALAFHLL-------CERASPNSFWQPYIQTLPSE 189

  Fly   139 YSTPYFCSIPELQCLPESLLERTVAQN-----RQIRGYFEIIKNIVHKCDCCGKSYGQEIWTLAD 198
            |.||.:....|::||..:.....|...     ||...::::|:...|    ..|...:|.:|..|
Mouse   190 YDTPLYFEEEEVRCLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPH----ANKLPLKESFTYED 250

  Fly   199 FKWAYFSVNTRSVHLSSRFLKKQSNYFQPLISGD-TNLALAPFLDLFNHSDQVEITAGIEGPDYV 262
            ::||..||.||...:             |...|. ..|||.|..|:.||::.: ||.|....|. 
Mouse   251 YRWAVSSVMTRQNQI-------------PTEDGSRVTLALIPLWDMCNHTNGL-ITTGYNLEDD- 300

  Fly   263 LTLKSLPFSETKPYDQLFISYGALPNFKLLTEYGFWLRENKHDYFEVSL--LDIEHMIKQNKEL- 324
             ..:.:...:.:..||::|.||...|.:.:...||:...|.||..::.|  ...:.:.....|: 
Mouse   301 -RCECVALQDFQAGDQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVL 364

  Fly   325 --------------STQ-TFHRNIFKFIR----------EHNLND-------------------- 344
                          ||: .....:..|:|          ||.|.|                    
Mouse   365 ARAGIPTSSVFALHSTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNAEFPVSWDN 429

  Fly   345 --QMFVHIDDGCSHNLRVVLHLIFKQQAYFPNILNQIAFGDAEQFQDVQPELSYLVEYKIKEYEI 407
              :::..::|..|..|:.....|.:.:....|                 |:||......||   :
Mouse   430 EVKLWTFLEDRASLLLKTYKTTIEEDKIVLKN-----------------PDLSVRATMAIK---L 474

  Fly   408 FGGELDKLPKLTESGAVARSYLQE 431
            ..||.:.|.|..:|.||.|.|.::
Mouse   475 RLGEKEILEKAVKSAAVNREYYRK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33230NP_995955.1 T6SS_VipB <229..>314 CDD:301628 24/87 (28%)
Setd3NP_001351195.1 SET 112..>146 CDD:307139 6/34 (18%)
Rubis-subs-bind 357..482 CDD:312693 21/144 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1337
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1321
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.